| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1754 |
|---|
| Symbol | bioD |
|---|
| ID | 5370703 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | + |
|---|
| Start bp | 2113579 |
|---|
| End bp | 2114319 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640829957 |
|---|
| Product | dithiobiotin synthetase |
|---|
| Protein accession | YP_001365960 |
|---|
| Protein GI | 153000279 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0132] Dethiobiotin synthetase |
|---|
| TIGRFAM ID | [TIGR00347] dethiobiotin synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.235022 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTTTTG TAACAGGTAC AGATACCGAC AGTGGTAAAA CCTTAGTCTC ATCGGCGCTG
TTAACCGCGG TGAACCGTTT GGGCGCGATA GCCAGTGCTG ACTCGGCTGT GAGTATTTTA
GCGTCTAACA CGCTGTCGAC CTTAGGTGTT AAGCCCATTG CCTCGGGCTG CGCACAAACC
TCCGAAGGCT TGCGTAATGC CGATGCACTG CAGTTGATGA CTTCATCGTC GCTGAAACTT
ACTTATCCTG TCATTAATCC TTTTACCTTT GAACCTGCAA TTGCGCCGCA TATTGCTGCC
GCCCAAGTGG GCGTGAGCTT AGCGCCTGAG GCTATTATCG AAAGTTTGGA TTTAGCGGCA
TTTGCTCAAG CGGATTTTTG TTTGATTGAG GGCGCGGGTG GCTGGCGTTT GCCCTTAGGC
GAGGGCCGAT ATTTATCGGA GGTGGTACAG AGATTAGAAC TGCCAGTGAT ACTCGTGGTG
GGCATGAAGC TCGGTTGCTT AAATCACGCA CTGCTCACTC AAGAGGCAAT ATTGGCCGAT
GGGCTTAAGA TTGCAGGTTG GGTCGCCAAT TGTGTCGACC CGAATATGAG TATGTTTGCG
GAAAACTTGG CGAGTCTTAA AGAGATGATG TCAGCGCCTT TCCTCGGCTG TGTGCCTTTT
CTTGATGATC CCAGTGCTGA AAATGCCGCC GATTATCTTG ATACTTCGCC GCTTTTTCAA
AGCGTTGAGG CTAATGCATA G
|
|---|
| Protein sequence | MFFVTGTDTD SGKTLVSSAL LTAVNRLGAI ASADSAVSIL ASNTLSTLGV KPIASGCAQT
SEGLRNADAL QLMTSSSLKL TYPVINPFTF EPAIAPHIAA AQVGVSLAPE AIIESLDLAA
FAQADFCLIE GAGGWRLPLG EGRYLSEVVQ RLELPVILVV GMKLGCLNHA LLTQEAILAD
GLKIAGWVAN CVDPNMSMFA ENLASLKEMM SAPFLGCVPF LDDPSAENAA DYLDTSPLFQ
SVEANA
|
|---|
| |