| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1735 |
|---|
| Symbol | |
|---|
| ID | 5369733 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | - |
|---|
| Start bp | 2087654 |
|---|
| End bp | 2088325 |
|---|
| Gene Length | 672 bp |
|---|
| Protein Length | 223 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640829931 |
|---|
| Product | ribonuclease T |
|---|
| Protein accession | YP_001365941 |
|---|
| Protein GI | 153000260 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
|---|
| TIGRFAM ID | [TIGR01298] ribonuclease T |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000000000754481 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGACA TTTGCGACGC GAACAAATTG AAATACCGAT TTCGAGGCTA CTTTCCCGTA
GTCATTGATG TCGAAACTGC GGGCTTCAAC TCTCAAACCG ATGCGTTGCT AGAAATTGCC
GTCACCCTAC TGAAAATGGA CAATGAAGGC GTGATAGGAA TCGACAAAAC CCTACACTTC
CACATTGAGC CCTTTGAAGG CGCAAATTTA GAACCCGAAG CGTTAGCATT CAACGGTATT
GATCCCACTA ATCCGTTACG CGGAGCTGTG AGCGAGAAAG AAGCCTTTTT GGAAATCTTT
AAAGCGGTCA AAAAAGCCCA AAAAGCCTCT GACTGCCATC GCAGTATCAT AGTGGCGCAT
AATGCCGCCT TTGATCATGG TTTTGTAAGT AAGGCGATTG AACGTTGCGA CTTAAAACGC
TCGCCGTTTC ATCCTTTTGC TACTTTCGAT ACTGCTACAC TCGCCGGACT TGCCATTGGT
CATACCGTAC TTGCCAAAGC ATGCATCATG GCGGGCATTC CCTTCGATAA TAAAGAAGCC
CATTCTGCGC TATATGATAC CGAACGTACC GCAGAGCTTT TTTGTCACAT AGTGAATCGT
TGGAAATCAT TAGGCGGCTG GCCGTTACTG GCCGTGGATG AGCAGGATGC ACAAAGCGGT
ACTGAGGCAT AA
|
|---|
| Protein sequence | MSDICDANKL KYRFRGYFPV VIDVETAGFN SQTDALLEIA VTLLKMDNEG VIGIDKTLHF
HIEPFEGANL EPEALAFNGI DPTNPLRGAV SEKEAFLEIF KAVKKAQKAS DCHRSIIVAH
NAAFDHGFVS KAIERCDLKR SPFHPFATFD TATLAGLAIG HTVLAKACIM AGIPFDNKEA
HSALYDTERT AELFCHIVNR WKSLGGWPLL AVDEQDAQSG TEA
|
|---|
| |