Gene Shew185_1731 details

Gene Information

• Locus tag: Shew185_1731
• Symbol: upp
• ID: 5371805
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS185
• Kingdom: Bacteria
• Replicon accession: NC_009665
• Strand: +
• Start bp: 2082751
• End bp: 2083377
• Gene Length: 627 bp
• Protein Length: 208 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 640829927
• Product: uracil phosphoribosyltransferase
• Protein accession: YP_001365937
• Protein GI: 153000256
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0035] Uracil phosphoribosyltransferase
• TIGRFAM ID: [TIGR01091] uracil phosphoribosyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.00552662
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAGTTG TCGAGGTTAA ACATCCTTTA GTGCGTCACA AAATCGGTTT AATGCGCGAA 
GGTGACATTA GCACTAAACG TTTCCGTGAG CTAGCCGCCG AAGTGGGCAG TTTATTAACC 
TATGAAGCTA CCGCAGATTT CGAAACTGAA ACGGTGACGA TTGAAGGCTG GAACGGTCCG 
GTTGAAGTCG ACCAAATCAA AGGTAAAAAA GTCACTGTTG TGCCGATTTT ACGTGCGGGT 
TTGGGCATGA TGGACGGTGT ACTTGAGCAT ATCCCAAGTG CGCGTATTTC AGTTGTCGGC 
ATTTACCGTG ACGAAGAAAC TCTTGAGCCT GTGCCATATT TTGAAAAACT CGCCAGTGAC 
ATGAACGAGC GTATCGCCTT AGTTGTCGAC CCAATGCTCG CGACTGGTGG CTCTATGATT 
GCGACCGTCG ACTTATTGAA GAAACGCGGT TGTACTTCAA TCAAAGCCTT AGTGTTAGTG 
GCTGCACCTG AAGGGATCAA AGCGTTAGAA GCGGCGCATC CTGATATCGA GTTATATACC 
GCTGCTATCG ACAAGTGCCT CAATGAGAAG GGCTATATCC TGCCAGGTCT TGGTGATGCG 
GGCGATAAAA TCTTTGGTAC TAAATAA 

 

Protein sequence

MKVVEVKHPL VRHKIGLMRE GDISTKRFRE LAAEVGSLLT YEATADFETE TVTIEGWNGP 
VEVDQIKGKK VTVVPILRAG LGMMDGVLEH IPSARISVVG IYRDEETLEP VPYFEKLASD 
MNERIALVVD PMLATGGSMI ATVDLLKKRG CTSIKALVLV AAPEGIKALE AAHPDIELYT 
AAIDKCLNEK GYILPGLGDA GDKIFGTK