Gene Shew185_1727 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1727 
Symbol 
ID5372553 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp2077910 
End bp2079586 
Gene Length1677 bp 
Protein Length558 aa 
Translation table11 
GC content50% 
IMG OID640829923 
Productpeptidase M28 
Protein accessionYP_001365933 
Protein GI153000252 
COG category[R] General function prediction only 
COG ID[COG2234] Predicted aminopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00112053 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGACGTC TGTATCCACT CTGTGCGCTG GCTATGCTCA GTGCCTGTAG TCCGAATTCA 
TCCCAATCCG ATGGCAACAT TACTTTGGCT GAACTTAAAA CAGTGCAGTT TAATGAAGCG
CGCTTTAGAA ATGATATTAA AGCCCTGTCA TCCGATGAAT TTGAAGGTCG AGCACCGACC
ACTCACGGTG AAAAACTCAC CTTGAACTAT TTGACTAAAG CCTTTACAGA GATGGGGCTC
AAGGGCGCGT ATCAAGGCAG CTTTTTGCAA CCTGTGCCTA TGGTGAGCTA TACCGCAGAT
GAAGCGCAGC AAGTTACGCT GGCAGGATTA CCCTTTAAAT ACCGGAAAGA TCTGGTGCTC
AGCAGTCGTC ACGATAACGG TGGCATTAAC ATTGAAAACG CGCCATTAGT CTTCGTTGGC
TATGGGGTGA ACGCACCCGA ATATGGTTGG AATGATTACC AAGATCTCGA CATGAAAGGC
AAAATCGCGG TGATCTTAGT GAACGATCCC GGCTTTGCTC GCCCTGACTC GGGTAAATTC
AACGGCAAAG CCATGACCTA TTACGGCCGC TGGAGCTATA AGTTTGAAGA AGCCAGCCGT
CAAGGCGCCC TTGGCGCGCT GATCATCCAT GATACTGAAC CCGCCTCTTA TCCTTGGTCT
GTGGTAGAAA ATAGCTGGAC TGGGCCACAG CAAGATCTGG TGCTGAGTAA AGCCGAACAA
GATAGCCGCA TCCAAGTCGA AGGCTGGCTT ACATTGGACG CAGCAACCCA ACTGTTTGAT
AAAGCGGGTT TATCACTGCC GAGCTTGATG GCGCGCGCCG CCGACAGCCC AATTAATGTC
CCCCTTGAGC AAACTGGCAG TATCTCCTTT AAAAATAAAG CCGAATACGC AAATAGCTAC
AACGTGGTCG CCACGCTCCC CGGCAGCACA CAAGCCGACG AGCAGATCCT CTACACCGCC
CATTGGGATC ACATAGGTAA AGACGAGACG AAAGCAGGCG ATCAGATTTA CAACGGCGCC
ATGGACAATG CCTCAGGCAC TGCCGGCATT CTCGAAATCG CCAGACAATT AGCCGATAAT
GCGAAACAAG GCCACGGTTT AGCGCGCTCG GTCACCTTTA TTGCCACCAC AGGTGAAGAA
CAGGGCTTAC TCGGTTCGCG CTATTACGCT GCCAATCCAC TTTACCCTAT CGACAAAACC
GTGGCAGTGT TAAACCTCGA CAGCACGAAT ATCTACGGTA AAACCAATGA CTTTACCATC
GTTGGCAAAG GTAAATCTGA GTTAGAAACC TACCTTATCG ATGCGGCGAA ACAACAAAAC
CGCATCGCCA TGGGTGAGAA AAATCCCGCT TCGGGCGGTT TCTTCCGTTC AGATCATTTC
AGCTTTGCCA AACTGGGCGT GCCAGCGGTA TTTGCCGGCG GCGGTAGCGA CCCCGTTGAT
GAAGCCACGG CTGCTTATAA AACCCAGATG CAAGCGACAA TGAAAGGCTG TTATCACAAT
GTCTGCGATG AATACCGTGA AGACTGGGAT TTGAGCGGCG CGCTGCAAGA TTTGCAAATC
TACTACCAAG TCACGCGCAC ATTGGGCAAC AGCAAAGATT GGCCGGGATA CTATCAAGGC
ACAGAGTTCA ATAGCCTGCG CCCAGCTAAA ACGACGCTTG TGACAGATAC AAAATAG
 
Protein sequence
MRRLYPLCAL AMLSACSPNS SQSDGNITLA ELKTVQFNEA RFRNDIKALS SDEFEGRAPT 
THGEKLTLNY LTKAFTEMGL KGAYQGSFLQ PVPMVSYTAD EAQQVTLAGL PFKYRKDLVL
SSRHDNGGIN IENAPLVFVG YGVNAPEYGW NDYQDLDMKG KIAVILVNDP GFARPDSGKF
NGKAMTYYGR WSYKFEEASR QGALGALIIH DTEPASYPWS VVENSWTGPQ QDLVLSKAEQ
DSRIQVEGWL TLDAATQLFD KAGLSLPSLM ARAADSPINV PLEQTGSISF KNKAEYANSY
NVVATLPGST QADEQILYTA HWDHIGKDET KAGDQIYNGA MDNASGTAGI LEIARQLADN
AKQGHGLARS VTFIATTGEE QGLLGSRYYA ANPLYPIDKT VAVLNLDSTN IYGKTNDFTI
VGKGKSELET YLIDAAKQQN RIAMGEKNPA SGGFFRSDHF SFAKLGVPAV FAGGGSDPVD
EATAAYKTQM QATMKGCYHN VCDEYREDWD LSGALQDLQI YYQVTRTLGN SKDWPGYYQG
TEFNSLRPAK TTLVTDTK