Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_1727 |
Symbol | |
ID | 5372553 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 2077910 |
End bp | 2079586 |
Gene Length | 1677 bp |
Protein Length | 558 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640829923 |
Product | peptidase M28 |
Protein accession | YP_001365933 |
Protein GI | 153000252 |
COG category | [R] General function prediction only |
COG ID | [COG2234] Predicted aminopeptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00112053 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGACGTC TGTATCCACT CTGTGCGCTG GCTATGCTCA GTGCCTGTAG TCCGAATTCA TCCCAATCCG ATGGCAACAT TACTTTGGCT GAACTTAAAA CAGTGCAGTT TAATGAAGCG CGCTTTAGAA ATGATATTAA AGCCCTGTCA TCCGATGAAT TTGAAGGTCG AGCACCGACC ACTCACGGTG AAAAACTCAC CTTGAACTAT TTGACTAAAG CCTTTACAGA GATGGGGCTC AAGGGCGCGT ATCAAGGCAG CTTTTTGCAA CCTGTGCCTA TGGTGAGCTA TACCGCAGAT GAAGCGCAGC AAGTTACGCT GGCAGGATTA CCCTTTAAAT ACCGGAAAGA TCTGGTGCTC AGCAGTCGTC ACGATAACGG TGGCATTAAC ATTGAAAACG CGCCATTAGT CTTCGTTGGC TATGGGGTGA ACGCACCCGA ATATGGTTGG AATGATTACC AAGATCTCGA CATGAAAGGC AAAATCGCGG TGATCTTAGT GAACGATCCC GGCTTTGCTC GCCCTGACTC GGGTAAATTC AACGGCAAAG CCATGACCTA TTACGGCCGC TGGAGCTATA AGTTTGAAGA AGCCAGCCGT CAAGGCGCCC TTGGCGCGCT GATCATCCAT GATACTGAAC CCGCCTCTTA TCCTTGGTCT GTGGTAGAAA ATAGCTGGAC TGGGCCACAG CAAGATCTGG TGCTGAGTAA AGCCGAACAA GATAGCCGCA TCCAAGTCGA AGGCTGGCTT ACATTGGACG CAGCAACCCA ACTGTTTGAT AAAGCGGGTT TATCACTGCC GAGCTTGATG GCGCGCGCCG CCGACAGCCC AATTAATGTC CCCCTTGAGC AAACTGGCAG TATCTCCTTT AAAAATAAAG CCGAATACGC AAATAGCTAC AACGTGGTCG CCACGCTCCC CGGCAGCACA CAAGCCGACG AGCAGATCCT CTACACCGCC CATTGGGATC ACATAGGTAA AGACGAGACG AAAGCAGGCG ATCAGATTTA CAACGGCGCC ATGGACAATG CCTCAGGCAC TGCCGGCATT CTCGAAATCG CCAGACAATT AGCCGATAAT GCGAAACAAG GCCACGGTTT AGCGCGCTCG GTCACCTTTA TTGCCACCAC AGGTGAAGAA CAGGGCTTAC TCGGTTCGCG CTATTACGCT GCCAATCCAC TTTACCCTAT CGACAAAACC GTGGCAGTGT TAAACCTCGA CAGCACGAAT ATCTACGGTA AAACCAATGA CTTTACCATC GTTGGCAAAG GTAAATCTGA GTTAGAAACC TACCTTATCG ATGCGGCGAA ACAACAAAAC CGCATCGCCA TGGGTGAGAA AAATCCCGCT TCGGGCGGTT TCTTCCGTTC AGATCATTTC AGCTTTGCCA AACTGGGCGT GCCAGCGGTA TTTGCCGGCG GCGGTAGCGA CCCCGTTGAT GAAGCCACGG CTGCTTATAA AACCCAGATG CAAGCGACAA TGAAAGGCTG TTATCACAAT GTCTGCGATG AATACCGTGA AGACTGGGAT TTGAGCGGCG CGCTGCAAGA TTTGCAAATC TACTACCAAG TCACGCGCAC ATTGGGCAAC AGCAAAGATT GGCCGGGATA CTATCAAGGC ACAGAGTTCA ATAGCCTGCG CCCAGCTAAA ACGACGCTTG TGACAGATAC AAAATAG
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Protein sequence | MRRLYPLCAL AMLSACSPNS SQSDGNITLA ELKTVQFNEA RFRNDIKALS SDEFEGRAPT THGEKLTLNY LTKAFTEMGL KGAYQGSFLQ PVPMVSYTAD EAQQVTLAGL PFKYRKDLVL SSRHDNGGIN IENAPLVFVG YGVNAPEYGW NDYQDLDMKG KIAVILVNDP GFARPDSGKF NGKAMTYYGR WSYKFEEASR QGALGALIIH DTEPASYPWS VVENSWTGPQ QDLVLSKAEQ DSRIQVEGWL TLDAATQLFD KAGLSLPSLM ARAADSPINV PLEQTGSISF KNKAEYANSY NVVATLPGST QADEQILYTA HWDHIGKDET KAGDQIYNGA MDNASGTAGI LEIARQLADN AKQGHGLARS VTFIATTGEE QGLLGSRYYA ANPLYPIDKT VAVLNLDSTN IYGKTNDFTI VGKGKSELET YLIDAAKQQN RIAMGEKNPA SGGFFRSDHF SFAKLGVPAV FAGGGSDPVD EATAAYKTQM QATMKGCYHN VCDEYREDWD LSGALQDLQI YYQVTRTLGN SKDWPGYYQG TEFNSLRPAK TTLVTDTK
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