Gene Shew185_1720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1720 
Symbol 
ID5370800 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand+ 
Start bp2066747 
End bp2067226 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content49% 
IMG OID640829916 
Productthioesterase superfamily protein 
Protein accessionYP_001365926 
Protein GI153000245 
COG category[I] Lipid transport and metabolism 
COG ID[COG1607] Acyl-CoA hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.00965102 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGGTA TCGATAGACA AAGCACCCTG AGATTTTTGT CAGAGCCTGC GGATGTAAAT 
TTTGGTGGTA AGGTCCACGG TGGCGCTGTG ATGAAGTGGA TCGATCTCGC GGCCTATGCC 
TGTGCAGCGG GTTGGAGCGG TAAATATTGT ATTACTGCCT ATGCGGGCGG GATTCGTTTT 
GTGCAACCCA TTTTAGTGGG CAACATAGTC GAAGTCAGCG CTAAGGTGAT TTATACGGGG 
AAAACTTCTA TGCATATCGG TATCGATGTG CGGGCCGGCG ATCCTAAAGT ATCTGAACGT 
CATCTCACTA CCCACTGTAT TGTGATCATG GTGGCTGTTG ATGAACATGG CCAGCCTACG 
CCAGTGCCTG AGTGGATACC ACAGACTGAA CATGATATTC ATTTGCGCGA TTCTGCGCTG 
CGCTTGATGG AAATGCGTAA AAAGATTGGC GCCGAAATGG AAGCTCACGT GGTGAAATAG
 
Protein sequence
MAGIDRQSTL RFLSEPADVN FGGKVHGGAV MKWIDLAAYA CAAGWSGKYC ITAYAGGIRF 
VQPILVGNIV EVSAKVIYTG KTSMHIGIDV RAGDPKVSER HLTTHCIVIM VAVDEHGQPT 
PVPEWIPQTE HDIHLRDSAL RLMEMRKKIG AEMEAHVVK