| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1704 |
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| Symbol | rrmA |
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| ID | 5371592 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 2049165 |
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| End bp | 2049980 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640829900 |
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| Product | 23S rRNA methyltransferase A |
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| Protein accession | YP_001365910 |
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| Protein GI | 153000229 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0000062625 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACTATT TATGTCCCCT GTGTTCCGCG CCGCTGACGT TAACGGACCG CACTTGGGGT
TGTCCACAGC AACATAAGTT TGACATGGCT AAAGAGGGTT ATGTCAACTT ATTGCCCGTA
CAGAAGAAAA ACTCAAAAGA TCCTGGTGAT AACAAGCAGA TGATGTTTGC TCGGCGTGAA
TTTTTAAACG AAGGGTATTA TCAAGGCTTG AGTGATAAAG TGAATGAACT CGCGATCGAG
TTTGGTGCTG ATGCAAAACA GATCCTTGAT ATAGGCTGTG GGGAAGGGTA CTACAGCCAG
CGTTTATTCA ATGTGTTGAG TCAGCACCAT GATTGTGATT TACAAGGCAT AGATATTTCT
AAGTCAGCAA TTAAATATGC GGCTAAACGC TACCCCAATT TAGCATTTTG TGTGGCAAGT
GCCTATGAGA TGCCCATCGC CTCTCAAAGT GTCGATCTTG CCATTCGCAT TTATGCACCT
TCCAAAGTTG AAGAGTTACA ACGCATTATG GCCGATGGTG GTATCTTGAT AACAGTCTCT
CCCGGACCTT CGCATCACTT CGCTTTGAAG CAACAAATAT ATGCAGAACC TAGATTGCAT
CCTGTATCTG CTGCGTATAT TGCTGGTTTT GAGTGCCTGC ATCAGGAACG CTTAATTTCT
CAGCTTGAAC TGACAAAAAG TGATCACATT GCTCATTTTT TAGAAATGAC GCCTTACGCT
TGGAAGTTTA CCGATGCGCA AAAGCGAGCA TTTGCTCTGC AAGGACTAAG CTGTGAATTG
GATTTCCAAA TTGAAGTGCA TCGCATTTCA AGATAA
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| Protein sequence | MHYLCPLCSA PLTLTDRTWG CPQQHKFDMA KEGYVNLLPV QKKNSKDPGD NKQMMFARRE
FLNEGYYQGL SDKVNELAIE FGADAKQILD IGCGEGYYSQ RLFNVLSQHH DCDLQGIDIS
KSAIKYAAKR YPNLAFCVAS AYEMPIASQS VDLAIRIYAP SKVEELQRIM ADGGILITVS
PGPSHHFALK QQIYAEPRLH PVSAAYIAGF ECLHQERLIS QLELTKSDHI AHFLEMTPYA
WKFTDAQKRA FALQGLSCEL DFQIEVHRIS R
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