| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1683 |
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| Symbol | |
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| ID | 5371180 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 2031989 |
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| End bp | 2032852 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640829880 |
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| Product | phage integrase family protein |
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| Protein accession | YP_001365890 |
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| Protein GI | 153000209 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCATCAC TTCTGCAACA ATTCCATGAT GAGATCAGTT TACGTGGTTA CTCGGCCCGT
ACACGCAGTG CTTATCTGCG TGCCATCACC CAACTGCAGC ACTATGCAAA CCAACCGCTC
GATAGCATTA CGGATGAGCA GCTTACGGCT TATTTCCGTT ACTTAAATCT TGAGCGACAT
CATTCCAGAG CCACCTTAAA GCTACAGCTT AATGGCATTC ATTTTTTCTA TGAACATGTC
CTAGGGCGCG ATTTTACGGT TCAGTTGAGT TTACCTAAAC GTCCACACAA GCTGCCGCAA
TTGCTTAGCT GCCAAGATAT CGCGGCATTG CTGTGTCACT GTCAAAACCT GAAACAACGC
GCTATGTTGG CGCTGTGTTA TGGTTGTGGT TTGCGTGTCA GTGAGTTAAC CCATATTAAG
GTTGCTGATA TCGATGGGCA GCGGCAGTTG CTCAAAGTGT GTCAAGGGAA AGGGGCCTAC
GACAGGTTGG TGATTATTTC ACCGACCTTG CTCACCCTGT TGCGTCAGTA TTGGCGAGCG
TATCATCCCG TCGAATGGTT GTTTGCCTCG ACCTATCATG ATGTGGTTTA TCCGCTGCAT
GAGTCGACCT TTCGTAAAGC GTTAGCGAAG GCGGCCCGCT TAGCGGGTAT CACTAAGCCA
TGCAGTCCAC ACAGCCTAAG GCATGCTTAT GCGACCCATC AATTACAAGC GGGTATGCCC
CTTCATCAAT TACAGGCCCA ACTTGGGCAT CACAGTATCA AGTCTACTGA ACGCTACTTG
CATTGGTCGC CGGAATTAGG TCATCAAGGC TGTGACTTGC TAGCAAGTCT TGGGGGGATG
CCATGGCAAC CTCCTACCAT TTAA
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| Protein sequence | MSSLLQQFHD EISLRGYSAR TRSAYLRAIT QLQHYANQPL DSITDEQLTA YFRYLNLERH
HSRATLKLQL NGIHFFYEHV LGRDFTVQLS LPKRPHKLPQ LLSCQDIAAL LCHCQNLKQR
AMLALCYGCG LRVSELTHIK VADIDGQRQL LKVCQGKGAY DRLVIISPTL LTLLRQYWRA
YHPVEWLFAS TYHDVVYPLH ESTFRKALAK AARLAGITKP CSPHSLRHAY ATHQLQAGMP
LHQLQAQLGH HSIKSTERYL HWSPELGHQG CDLLASLGGM PWQPPTI
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