| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1682 |
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| Symbol | |
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| ID | 5370782 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 2030741 |
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| End bp | 2031700 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640829879 |
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| Product | integron integrase |
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| Protein accession | YP_001365889 |
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| Protein GI | 153000208 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02249] integron integrase |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTATAA AAAGCCCTTT TTTAAGCGGT GTTCAAGAAG AAATGCGCAT GCGTGGTTAC
AGTATCAGAA CAGAAAAATC CTACCTGTAT TGGATCAAGG CGTTCATTAA CTTTCACCAC
AAGCGTCATC CTGAAACGAT GGGAACAGAG GAGGTCGCAC AATTCTTAAC CTTCCTTGCC
AATCAACGGA ATGTGGCTAT CAACACTCAA AAAATTGCAC TGAACGCGTT AGCCTATTTG
TACCAGAAAC ATTTGCATCA TGAGCTTGGA AATTTAGGTT TTTGCTATGC CACTAAACAA
CGTTATTTAC CTACAGTGTT ATCCCCTTCA GAAATCTCAC TAATACTAAA TGAGCTTGAT
GGCCGCGATA GGCTAATAAT AGAACTACTC TATGGTAGTG GACTGAGAGT TTCAGAATGC
CTCAGGTTAC GTATCCAAGA TATTGATATT GAACAAGCTT CGTTGACTGT GAGGGATGGT
AAAGGTCATA AAGATAGACA AACAATCCTT AGCCATAAAT GTGCCATTAA ACTCACAGCA
TATATTAATA AAGCAATGGA GATTCAACAC CGTGACAACC AACAAGGGAT CGGTCCTTCC
CTACCCAATG CGTTAGAGCG TAAGTATCCA AATGCCTTTA AGCAACACGG ATGGATGTTC
ATTTTCCCTT CAACCACAAC CTGCATTAAT CCTTATACAG GAAAGCTTTG CAGGCATCAT
CTTCATCAGA GTGTTATTCG TAAAGCGCTC GGCAATGCGG TGCGTAACAT CAAAATAACT
AAGCGTGTTA CCTGTCATAC ATTTAGACAT AGCTTTGCAA CCCATCTACT TCAATCGGGC
AGTGATATCA GAAGTGTTCA GGAGCTACTT GGCCATAATG ACGTTAGTAC AACACAAATC
TACACCCATG TGCTTGGCCA ACATTACGCA GGGACAACGA GTCCATTAGA TAAGTTATAA
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| Protein sequence | MSIKSPFLSG VQEEMRMRGY SIRTEKSYLY WIKAFINFHH KRHPETMGTE EVAQFLTFLA
NQRNVAINTQ KIALNALAYL YQKHLHHELG NLGFCYATKQ RYLPTVLSPS EISLILNELD
GRDRLIIELL YGSGLRVSEC LRLRIQDIDI EQASLTVRDG KGHKDRQTIL SHKCAIKLTA
YINKAMEIQH RDNQQGIGPS LPNALERKYP NAFKQHGWMF IFPSTTTCIN PYTGKLCRHH
LHQSVIRKAL GNAVRNIKIT KRVTCHTFRH SFATHLLQSG SDIRSVQELL GHNDVSTTQI
YTHVLGQHYA GTTSPLDKL
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