Gene Shew185_1653 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1653 
SymbolribA 
ID5371033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand+ 
Start bp2000896 
End bp2001510 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content46% 
IMG OID640829851 
ProductGTP cyclohydrolase II 
Protein accessionYP_001365861 
Protein GI153000180 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0807] GTP cyclohydrolase II 
TIGRFAM ID[TIGR00505] GTP cyclohydrolase II 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.475314 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGATAA AATATGTCGC GACGTCAAAG TTACCCACTC CTTGGGGCGT GTTTGCCATG 
CATGGTTTTG AAGATACAGA ATCAGGCAAA GAGCATGTTG CGCTCACATT CGGTACGCTC 
AGTGCGGATG AACCTGTGTT GGGTCGAATT CATTCCGAGT GTTTAACTGG CGATGCGTTA 
TTTAGCTTGC GTTGTGACTG TGGTTTTCAG TTACAAGCGG CGATGCAAAA TATTGCAGAA 
ACGGGCAGTG GCTTTATCCT CTATTTGCGC CAAGAAGGCC GTGGCATTGG TTTGTTGAAT 
AAAATCCGCG CCTACGAGCT GCAAGATAAA GGTGCCAACA CAGTTGAAGC CAACGAGCAA 
CTGGGCTTCG AAGCCGATAT GCGTAAATAC GACATGATCA AACCTATGCT GGAACAGATA 
GGCGTGAAGC ATGTGCGTTT GATGACCAAT AACCCTCGTA AAGTGAAAGC AATGAAGGAG 
TTTGGCATCG AAGTGGTTGA GCGCGTACCG CTGCAAGTTG GTAAGAATCG TTACAACGAA 
GCCTACTTAA AAACCAAATC CACTGAGCTT GGACACATGA TGTCTGAATA TCATTTTATG 
GATGAAAATA AGTAG
 
Protein sequence
MSIKYVATSK LPTPWGVFAM HGFEDTESGK EHVALTFGTL SADEPVLGRI HSECLTGDAL 
FSLRCDCGFQ LQAAMQNIAE TGSGFILYLR QEGRGIGLLN KIRAYELQDK GANTVEANEQ 
LGFEADMRKY DMIKPMLEQI GVKHVRLMTN NPRKVKAMKE FGIEVVERVP LQVGKNRYNE 
AYLKTKSTEL GHMMSEYHFM DENK