| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1650 |
|---|
| Symbol | |
|---|
| ID | 5370843 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | + |
|---|
| Start bp | 1997459 |
|---|
| End bp | 1999576 |
|---|
| Gene Length | 2118 bp |
|---|
| Protein Length | 705 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640829848 |
|---|
| Product | anaerobic ribonucleoside triphosphate reductase |
|---|
| Protein accession | YP_001365858 |
|---|
| Protein GI | 153000177 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1328] Oxygen-sensitive ribonucleoside-triphosphate reductase |
|---|
| TIGRFAM ID | [TIGR02487] anaerobic ribonucleoside-triphosphate reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGTCG TAATTAAGCG TGATGGTTGC CGCACACCTT TTGATGAAAC AAGGATACGG
GATGCAGTGA ATGCCGCTGC AAACTCAGTT GGGATAGAGG ATGGCGACTA TGCAGCGACA
GTGGCAGCGT GTATCAGTCA AAGCGTTGCG ACCTTAACCG AAGTTGATAT CCATCATCTA
CAGGATGCGG TTGAGAATTT ACTGATGGAA GGGCCGTATA AGTCCTTGGC GCGGGTTTAT
ATCGAATACC GTCACGACCG AGATGTGTGC CGTGAAGCGA CCAGTAAACT CAACCTCGAA
ATCCGTGGTT TAGTCGAGCA AAGTAATGCG GCGTTACTCA ATGAAAATGC TAATAAAGAT
TCGAAAGTTA TCCCAACTCA GCGGGATTTA CTCGCGGGCA TAGTCGCCAA ACATTATGCC
AAGAGTCATA TCTTGCCAAA GGACGTGGTT GCTGCCCATG AAGCGGGGGA GATCCACTAC
CACGACTTAG ATTACTCACC GTTTTTCCCG ATGTTTAACT GCATGCTGAT TGATTTGGCA
GGCATGTTGA CCCATGGCTT TAAAATGGGC AATGCCGAAA TCGAAACCCC TAAGTCCATC
TCAACGGCGA CAGCCGTCAC CGCACAGATC ATTGCCCAAG TGGCGAGCCA TATTTATGGC
GGCACGACCA TCAATCGCAT CGACGAAGTG TTAGCGCCAT TTGTCGCTAA GAGCTACGAC
AAGCACTACC AAATCGCCCT GAATTGGAAG ATCACCGACG CCAAAGCCTT TGCCACGGCG
CAAACTGAAA AAGAATGTCA CGATGCATTT CAGTCTTTGG AATATGAGGT TAATACCTTG
CATACCGCCA ATGGCCAAAC ACCGTTCGTG ACCTTTGGCT TTGGGTTAGG CACCTCGTGG
GAATCCCGCT TAATTCAGCA ATCTATGCTG AAAGTACGGA TGGCGGGATT GGGTAAAAAT
CGTAAGACGG CAGTTTTTCC TAAGTTAGTG TTTGCGATTC GTGATGGCAT TAATCACAAA
GCTGGCGATT GCAATTACGA TGTCAAACAG ATGGCGCTCA AGTGCGCGAC TATGCGCATG
TATCCCGATA TTCTCAATTA CGAGCAAGTC GAGAAAGTCA CAGGATCATT TAAAACCCCA
ATGGGTTGCC GCAGCTTTTT AGGCACCTAT GAGGAAAATG GCGAACTCGT GCATGAAGGG
CGCAATAATC TTGGGGTAGT GAGCTTAAAC TTGCCGCGGA TTGCCTTGGA AGCTAAGGGT
GATGAAGCGG AATTTTATCG TCTTTTAGAT GACAGATTAG TCTTAGCTCG TAAAGCGCTG
GATACTCGTA TCGAGCGACT CAATGGCGTC AAAGCCCGCG TGGCACCAAT CCTGTATATG
GAAGGGGCCT GTGGTGTGCG CTTGCGCGCC GATGATGATG TTTCTCAAAT CTTTAAAAAT
GGTCGCGCGT CGATTTCACT CGGTTACATT GGCCTGCATG AAACCATGAA TGCACTCTAT
GGCACCCAAA CCCATGTATT TGACGATGCA CAATTAAGGG ACAAAGCCGT AGCTATTGTT
GCCTATCTTA AAGCCGCCAC GGATGCGTGG AAGGCTGAAA CAGGTTATGG CTTTAGCCTG
TATAGCACGC CAAGTGAGAG TCTCTGCAGC CGTTTTTGTA AACTGGATGC GAAGCAATTT
GGCTTAGTCA CAGGCGTGAC AGACAAAGGC TATTACACTA ATAGCTTTCA CCTTGATGTG
GAAAAAAGCG TTAATCCTTA CGATAAAATT GATTTTGAAC AGCCATATCC CGCAATCGCG
AACGGCGGCT TTATTTGTTA TGGCGAATAT CCCAACATGC AGCATAACCT CGAAGCGCTG
GAAAACGTGT GGGATTATAG TTATAGCCGC GTGCCTTACT ATGGCACGAA CACGCCAATT
GATGAATGCT ACGACTGTGG CTTTACTGGC GAATTTAGCT GTACCAGTAA AGGGTTCACT
TGTCCTAAGT GCGGTAACCA TGAGCCAAGT CGGGTGTCAG TGACGCGCCG AGTCTGCGGT
TACTTAGGCA GCCCAGATGC GCGGCCCTTT AATTATGGTA AACAGGAAGA AGTAAAACGT
AGGATCAAAC ACTTGTAA
|
|---|
| Protein sequence | MPVVIKRDGC RTPFDETRIR DAVNAAANSV GIEDGDYAAT VAACISQSVA TLTEVDIHHL
QDAVENLLME GPYKSLARVY IEYRHDRDVC REATSKLNLE IRGLVEQSNA ALLNENANKD
SKVIPTQRDL LAGIVAKHYA KSHILPKDVV AAHEAGEIHY HDLDYSPFFP MFNCMLIDLA
GMLTHGFKMG NAEIETPKSI STATAVTAQI IAQVASHIYG GTTINRIDEV LAPFVAKSYD
KHYQIALNWK ITDAKAFATA QTEKECHDAF QSLEYEVNTL HTANGQTPFV TFGFGLGTSW
ESRLIQQSML KVRMAGLGKN RKTAVFPKLV FAIRDGINHK AGDCNYDVKQ MALKCATMRM
YPDILNYEQV EKVTGSFKTP MGCRSFLGTY EENGELVHEG RNNLGVVSLN LPRIALEAKG
DEAEFYRLLD DRLVLARKAL DTRIERLNGV KARVAPILYM EGACGVRLRA DDDVSQIFKN
GRASISLGYI GLHETMNALY GTQTHVFDDA QLRDKAVAIV AYLKAATDAW KAETGYGFSL
YSTPSESLCS RFCKLDAKQF GLVTGVTDKG YYTNSFHLDV EKSVNPYDKI DFEQPYPAIA
NGGFICYGEY PNMQHNLEAL ENVWDYSYSR VPYYGTNTPI DECYDCGFTG EFSCTSKGFT
CPKCGNHEPS RVSVTRRVCG YLGSPDARPF NYGKQEEVKR RIKHL
|
|---|
| |