| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1646 |
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| Symbol | |
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| ID | 5371211 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 1993632 |
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| End bp | 1994579 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640829844 |
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| Product | patatin |
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| Protein accession | YP_001365854 |
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| Protein GI | 153000173 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.183698 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTAACG GAACAACCCC TTCGGTTGGT ATTGCCTTGG GCAGTGGCGC TGCGAAAGGT
TGGGCGCACA TTGGCGTGTT GAATGGCCTT GCCGCCATGG GGATCAAACC CGATAAAGTT
GCGGGATGTT CGGTGGGCGC TTTAGTGGGC GCCGCGTACG CCCATGACCA TTTACCTGAA
TTAGAAGAAT GGGTGCGGAG TTTCTCTAGC TGGGACGTGC TTGGCTTGAT GGACATTCGA
TGGCGTAAAG GCGGCCTTAT CGGCGGTGAT AAGGTATTTG ATGTGCTGCA AGCTCGAATA
GGGGATGTGA ATATTGAGAA CCTAAACCGT CCTTTTGCGG CGGTTGCGAC CGACTTGTAC
TCTGGGCAGG AGATTTGGTT TACTGAAGGG GATTTACGTC AAGCGGTGCG CGCTTCTTGC
TCTATGCCGG GGATTTTGGC GCCCGTGAGA CAAGGTGACC GCTGGCTTGT CGATGGTGCT
GTGGTGAATC CAGTGCCTGT TTCTGTTAGC CGTGCCATGG GCGTCGATGT AGTGATAGCC
GTGGATTTAT ATGGTTATCA TTCTGGTCGC ATCCAAGTAT TGCCGGTGAG CATGACGAGC
CAAAAAAACG TTGAAGCTGA AATGGATATG TCAGCGCGAC AAGAAACTGG ATTTATGGAT
TTGTTTGCCC GTGGCCGAGA TTATGTCAGC AATCTGACCG ATAAGTTTTC ACTTGGCACT
AAATCGAATC CAGGCATGAT TGCTGTAATG TCGCAATCTA TGGGCATTTT AGAGCAAAGA
CATAAACGGG CGCGCTTGAT GGGCGATCCG CCAGATATTT GTATTGTGCC TGAGGTTGGC
AATATCGGCA CTATGGAGTT TCACCGTGCT GATGAGGCGA TTGCCGCTGG CGAAGCTGCT
GTGGAGAAGG TGGCTCACTT GATTGAAGCT GCACTGTGGA AGGGCTAA
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| Protein sequence | MANGTTPSVG IALGSGAAKG WAHIGVLNGL AAMGIKPDKV AGCSVGALVG AAYAHDHLPE
LEEWVRSFSS WDVLGLMDIR WRKGGLIGGD KVFDVLQARI GDVNIENLNR PFAAVATDLY
SGQEIWFTEG DLRQAVRASC SMPGILAPVR QGDRWLVDGA VVNPVPVSVS RAMGVDVVIA
VDLYGYHSGR IQVLPVSMTS QKNVEAEMDM SARQETGFMD LFARGRDYVS NLTDKFSLGT
KSNPGMIAVM SQSMGILEQR HKRARLMGDP PDICIVPEVG NIGTMEFHRA DEAIAAGEAA
VEKVAHLIEA ALWKG
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