| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1645 |
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| Symbol | |
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| ID | 5373204 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 1992027 |
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| End bp | 1993382 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640829843 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001365853 |
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| Protein GI | 153000172 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.55741 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCAATTTA CCGATTTTTC TCTGGACCAG CGTCTGCTTC AAAGCATAAA ACATATGGGG
ATCACTGAAC CCACCGCCAT CCAGGAACAA GCACTGCCTA TCGCATTGGC AGGTAAAGAT
TTAATGGCGT CATCAAAAAC AGGCTCAGGT AAAACCTTAG CGTTTTTGTT ACCCGCATTG
CAAAGAGTCA TTTCTACCCG CTCACTGTCA AAACGCGATC CTAGAGTATT GATTTTATTA
CCGACCCGCG AACTAGCACA TCAAGTGTAT AGTCAGCTTC GCTTGCTGGT CGCCAACACC
CAATACAAGG CCATCAGCGT TCTGGGCGGT GAAAACTTTA ACGACCAAGC GAAAGCCCTA
GCGAAAGAAC CGCATTTTAT TGTCGCGACG CCAGGCCGTA TCGCCGATCA TCTTGAGCAA
AAACATCTAT TCCTAAATGG CTTAGAATTA CTCGTGCTCG ATGAAGCCGA CCGCATGTTA
GATTTAGGCT TTGCCCCTCA GTTAAAAGCC ATCAACGATG CTGCCGATCA TAAACGTCGT
CAAACGCTGA TGTTTTCTGC CACATTAGAT CATGACGAAA TCAATGATAT CGCGGCAACG
CTGTTAAAAA ATCCAGCGCA CGTAGCGATT GGCGCGGCTC ACTCTGAGCA TAACGACATT
CACCAACGCA TCTTCTTATG TGACCACTTA GACCATAAAG AAGCGTTATT AGCCCGTTTA
CTTAAAGATG AAACACACAA GCAAGTGATC ATCTTTACCG CGACGCGCCC AGATACAGAG
CGCTTAGCCG CTAAATTAAC TGCGCAAGGT TTTGCAACCG CAGCACTCAG CGGTGATTTA
AAGCAAGCCG CACGCAACCA AATCATGGAC CAATTTGCCC GTGGCCAACA ACAAGTCCTA
GTGACGACCG ATGTCGCCTC TCGTGGTCTG GATTTGCTCA ATGTGTCCTT AGTTGTTAAC
TTCGACATGC CTAAATTTGC CGAGGAATAC GTGCATCGTA TCGGTCGTAC TGGCCGTGCT
GGTGCGAAAG GTGATGCGAT ATCGCTCGTC GGGCCTAAAG ATTGGGACAA CTTTAAGAAA
GTCCAAGTCT TCCTTAGAAA GACCTTTGAG ATCAGTACGA TTCCAGGTCT AGAAGCTAAA
TTTAGTGGTC TAAAAAGCAA AGCCAAACAG ACACCAGCAA AACGTGTTGC TAAAGCCGAG
CTTGCTAAAG GTAAGAGCAA AAGAACTAAA GCAGCCACAC CGGCGCCTTC ACGGGATAAG
CGTTTTATCA CGGGCGTGGA CATTGGCGAT GCACCAATGC GTAAAAAGCC TGCTGCGGCG
AAATTACTGC AAGACAATGA TACAGAAGAA GTTTAG
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| Protein sequence | MQFTDFSLDQ RLLQSIKHMG ITEPTAIQEQ ALPIALAGKD LMASSKTGSG KTLAFLLPAL
QRVISTRSLS KRDPRVLILL PTRELAHQVY SQLRLLVANT QYKAISVLGG ENFNDQAKAL
AKEPHFIVAT PGRIADHLEQ KHLFLNGLEL LVLDEADRML DLGFAPQLKA INDAADHKRR
QTLMFSATLD HDEINDIAAT LLKNPAHVAI GAAHSEHNDI HQRIFLCDHL DHKEALLARL
LKDETHKQVI IFTATRPDTE RLAAKLTAQG FATAALSGDL KQAARNQIMD QFARGQQQVL
VTTDVASRGL DLLNVSLVVN FDMPKFAEEY VHRIGRTGRA GAKGDAISLV GPKDWDNFKK
VQVFLRKTFE ISTIPGLEAK FSGLKSKAKQ TPAKRVAKAE LAKGKSKRTK AATPAPSRDK
RFITGVDIGD APMRKKPAAA KLLQDNDTEE V
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