Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_1638 |
Symbol | |
ID | 5369490 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 1982955 |
End bp | 1983725 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640829836 |
Product | hypothetical protein |
Protein accession | YP_001365846 |
Protein GI | 153000165 |
COG category | [R] General function prediction only |
COG ID | [COG0730] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0157393 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAATTTG AACTGACGCT ACAAATCGCT GCGATACTTT TTGCCGTCGC TATGGTGGCA GGTTTTATCG ACGCTATCGC CGGTGGCGGT GGCTTGTTGA CGATTCCTGC ACTCATGTGG ACTGGCTTGC CGCCTGCGGT TGCCTTAGGC ACAAATAAGC TGCAGGCCTG TGGCGGTAGT TTTTTTGCGA GCTTGTACTT TGTCCGTAAA GGACTCGTGG ATCTTAAATC CGTAAAGTTA GCCTTGATCT GTGCGTTCAT CGGCGCGGCA TTAGGCACTA TTCTCGTTCA ACTCGTCGAT ACCAAAGTGC TGGAATTAAT GTTGCCATTT TTGATTTTGG CAATTGGTTG TTACTTCTTA TTTTCGAAAA AGATTTCTGA AGACGATAAG CATCAAGTAC TGACACCTAC CGCGTTTGCG TTCACTGCCG CCTTAGGTGT GGGATTGTAC GATGGTTTTT TTGGTCCTGG CACTGGCAGC TTTTTTGCGC TGGCGTTTGT ATCGTTAGCA GGTTTTGGTT TGGCTAAGGC TACGGCTCAC GCGAAACTAC TTAATTTCTC AACCAACATA GCTTCGCTGA TTTTCTTCGC CTTGGGCGGC AAAGTGATTT GGTTATTGGG GTTAGTCATG CTCGCAGGAC AAGCGATTGG CGCAACTTTG GGTTCTCGTC TGGTTGTGAC TAAAGGCACG AAGATCATCA AGCCGCTCGT CGTGACTATG TCCCTTGCCA TGAGCTTTAA ACTCCTCGCA ACGCAATATC ACTTGTTCTA A
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Protein sequence | MEFELTLQIA AILFAVAMVA GFIDAIAGGG GLLTIPALMW TGLPPAVALG TNKLQACGGS FFASLYFVRK GLVDLKSVKL ALICAFIGAA LGTILVQLVD TKVLELMLPF LILAIGCYFL FSKKISEDDK HQVLTPTAFA FTAALGVGLY DGFFGPGTGS FFALAFVSLA GFGLAKATAH AKLLNFSTNI ASLIFFALGG KVIWLLGLVM LAGQAIGATL GSRLVVTKGT KIIKPLVVTM SLAMSFKLLA TQYHLF
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