Gene Shew185_1638 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1638 
Symbol 
ID5369490 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp1982955 
End bp1983725 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content48% 
IMG OID640829836 
Producthypothetical protein 
Protein accessionYP_001365846 
Protein GI153000165 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0157393 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATTTG AACTGACGCT ACAAATCGCT GCGATACTTT TTGCCGTCGC TATGGTGGCA 
GGTTTTATCG ACGCTATCGC CGGTGGCGGT GGCTTGTTGA CGATTCCTGC ACTCATGTGG
ACTGGCTTGC CGCCTGCGGT TGCCTTAGGC ACAAATAAGC TGCAGGCCTG TGGCGGTAGT
TTTTTTGCGA GCTTGTACTT TGTCCGTAAA GGACTCGTGG ATCTTAAATC CGTAAAGTTA
GCCTTGATCT GTGCGTTCAT CGGCGCGGCA TTAGGCACTA TTCTCGTTCA ACTCGTCGAT
ACCAAAGTGC TGGAATTAAT GTTGCCATTT TTGATTTTGG CAATTGGTTG TTACTTCTTA
TTTTCGAAAA AGATTTCTGA AGACGATAAG CATCAAGTAC TGACACCTAC CGCGTTTGCG
TTCACTGCCG CCTTAGGTGT GGGATTGTAC GATGGTTTTT TTGGTCCTGG CACTGGCAGC
TTTTTTGCGC TGGCGTTTGT ATCGTTAGCA GGTTTTGGTT TGGCTAAGGC TACGGCTCAC
GCGAAACTAC TTAATTTCTC AACCAACATA GCTTCGCTGA TTTTCTTCGC CTTGGGCGGC
AAAGTGATTT GGTTATTGGG GTTAGTCATG CTCGCAGGAC AAGCGATTGG CGCAACTTTG
GGTTCTCGTC TGGTTGTGAC TAAAGGCACG AAGATCATCA AGCCGCTCGT CGTGACTATG
TCCCTTGCCA TGAGCTTTAA ACTCCTCGCA ACGCAATATC ACTTGTTCTA A
 
Protein sequence
MEFELTLQIA AILFAVAMVA GFIDAIAGGG GLLTIPALMW TGLPPAVALG TNKLQACGGS 
FFASLYFVRK GLVDLKSVKL ALICAFIGAA LGTILVQLVD TKVLELMLPF LILAIGCYFL
FSKKISEDDK HQVLTPTAFA FTAALGVGLY DGFFGPGTGS FFALAFVSLA GFGLAKATAH
AKLLNFSTNI ASLIFFALGG KVIWLLGLVM LAGQAIGATL GSRLVVTKGT KIIKPLVVTM
SLAMSFKLLA TQYHLF