| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1630 |
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| Symbol | |
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| ID | 5369980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 1976210 |
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| End bp | 1977457 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640829828 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001365838 |
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| Protein GI | 153000157 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.298427 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTAATG TTAATAAAAT CGCAGCTCTA TTATTGCTTT CTGTTTGTGG CGGGACATTA
ACGCTTTCTT CTGCGGTAGC GGAAGAAAAG TGTCCTATCG ATAAACGTCA ATCTAAAGCG
GTAGGCGAAG GCGCAGCGAA GAAAGTTCAA AAGTCGTTCG AAGCTTATAC TAATGGCCAG
TTAGATGAAG CCATTGCTAT TTTGCTCGAA GCTAATGCTA AGAACGACTT CGATAAGGCT
TATGTTGCAC GCATGTTAGG TAACTTTTAT GCCGAAAAAG GCAAAATGGA TACTGCGATC
AAGTACCTAA AACAAGCTGT TGAAGCTGAT ATTTTAGGTG GCACAGATCA TGCTGCAACT
ATGCGTCTTT ATGCGGATTT GCTGTTACAA GAGAAGAAGT TTAAGGAATC GATTCCTTAC
TACTACAAGT GGATGGAATT CACTTGTAAA TCTGACTCTC AAATATACCG TCGTATTGGT
ATTGCATATT CAGAGCTAAA ACAGTGGGAT AAAGTGATTG AAGTGGCCGA TAAAGGTCTT
TCATTAGCTG AAGCTCCTGA TAAAGGTCTG TATCAGATGA AACTGACAGC TTACTTCAAC
CAGAAGAAGT ATAAGAAAGC TGTTGGTGTG TTAGAAGTCA TGGTGCCATT ATTCCCTGAA
GACGGCAGAC TGTGGGTTCA ATTAGCGCAG TTTTATTTGA TGGTTGAAGA CTATGACAAG
TCTCTTGCTA CTTACGATTT AGCTTATAGA AATGGTTTCT TAGAGAGCGC GGGTAACATT
ACCCGTTTAG CACAATTGAT GGCACAGAAA GGTGCTCCAT ATCAAGCTGC TAAAGTTTAT
CAGAAACACA TGAAATCAGG CTTGATTGCT GAGGATGCTA AGTCCTTAGA GATTTTGGCT
GGTTTCTATC AAAATGCTAA AGAGTTTAAG CAAGCAGCTG ATTATTATGG TAAAGCTGCC
GCTATAAGCA AGGATGGTAA GACTTACCTC AAACAAGGTC GCTTACTAAA CTTGGATGAA
CAATACACTG CTGCGATCCC TGTGCTTGAA AAAGCCATAT CCATGGGCAT TGATCATCCT
GGCGAAGCAA ACTTCGAATT AGCTTTGGCT CATTTAAGTT TGAAACAGTA CAAGTCAGCT
TATAACCGTG CAGTATTAGC TGCTAACGAT AAGAAGACTG AGAAGAGTGC AAATAGCTAT
ATCTCTTATA TCAAAGAGAA AGCACGTATG CATAACATCA CACTGTAA
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| Protein sequence | MRNVNKIAAL LLLSVCGGTL TLSSAVAEEK CPIDKRQSKA VGEGAAKKVQ KSFEAYTNGQ
LDEAIAILLE ANAKNDFDKA YVARMLGNFY AEKGKMDTAI KYLKQAVEAD ILGGTDHAAT
MRLYADLLLQ EKKFKESIPY YYKWMEFTCK SDSQIYRRIG IAYSELKQWD KVIEVADKGL
SLAEAPDKGL YQMKLTAYFN QKKYKKAVGV LEVMVPLFPE DGRLWVQLAQ FYLMVEDYDK
SLATYDLAYR NGFLESAGNI TRLAQLMAQK GAPYQAAKVY QKHMKSGLIA EDAKSLEILA
GFYQNAKEFK QAADYYGKAA AISKDGKTYL KQGRLLNLDE QYTAAIPVLE KAISMGIDHP
GEANFELALA HLSLKQYKSA YNRAVLAAND KKTEKSANSY ISYIKEKARM HNITL
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