| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1629 |
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| Symbol | |
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| ID | 5369979 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 1975587 |
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| End bp | 1976207 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640829827 |
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| Product | TonB family protein |
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| Protein accession | YP_001365837 |
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| Protein GI | 153000156 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.589143 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTAAGAG CACTAGTATC GATCATTATT GGTGCTGCTG TGACTTTTGG TCTGTTCGCT
TTTATGGCGT TCTTGGTCGG TGGCGGCGCA CAGCGCGGCG AAACATCGGC TGAGACCCCT
GTAATTGAAA TCACTATGGA TAGACAGGAT TCAAAAGCAC AGAATAAGCC AAGGGTAGTG
CCTAAGCCAC CACCACCACC AGAGCAACCA CAGAAGCCTG ATACAACGCC ACCTGATTCA
TCAAGTAATA TTGATACATC AATGTCGTTC AATATGGGTG GTGTAGAAGC TGGCGGTGCA
AGTACTGGTT TCAAATTAGG CAATATGATG ACTCGCGATG GTGATGCTAC GCCTATCGTT
CGTATCGAAC CTCAGTATCC AATTGCTGCG GCGCGTGATG GGAAAGAAGG TTGGGTACAA
CTTCGTTTCA CCATCAACGA ACTCGGTGGT ATCGATGACG TTGAAGTTAT TCAAGCAGAG
CCAAAACGTT TATTTGATAA AGAAGCGATT CGCGCACTGA AGAAGTGGAA GTACAAGCCA
AAGATTGTTG ATGGCAAGCC ACTGAAGCAA CCTGGTCAGA CAGTTCAGCT GGACTTTACC
TTAGATAAGG GAGGCAAATA A
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| Protein sequence | MLRALVSIII GAAVTFGLFA FMAFLVGGGA QRGETSAETP VIEITMDRQD SKAQNKPRVV
PKPPPPPEQP QKPDTTPPDS SSNIDTSMSF NMGGVEAGGA STGFKLGNMM TRDGDATPIV
RIEPQYPIAA ARDGKEGWVQ LRFTINELGG IDDVEVIQAE PKRLFDKEAI RALKKWKYKP
KIVDGKPLKQ PGQTVQLDFT LDKGGK
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