Gene Shew185_1628 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1628 
Symbol 
ID5370141 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp1975181 
End bp1975585 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content44% 
IMG OID640829826 
Productbiopolymer transport protein ExbD/TolR 
Protein accessionYP_001365836 
Protein GI153000155 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.426629 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACGTA AAAAGCATTC CAGTATAGAT GAGGAAGCGC AAATTGATAT GACACCGATG 
CTCGACATCG TGTTCATCAT GCTAATCTTC TTCATTGTAA CAACGTCATT CGTGAAACCA
TCTGGTTTGG ACTATAACAA ACCAAAAGCT TCACAAGCGA CTTCAAAGCC TTCGGCGAAC
ATCTTTATCG GCGTCAGCAA AACGGGCGTG ATCATGATGG AAAACCGTCA GGTTGATATC
GAACGTGTAA CAGCAAACGT TGAACGTATG CTGGCTGAAG CTCCTGAAGC TGCTGTATTG
ATTCAGGCTG ATAAAGACGC AATGCACGGC TTAGTTGTTA AAGTTCTAGA CCAAGTGAAA
GCGGCTGGTA TAGATAAAAT TTCGGTATCT GCGGGGAACG ATTAA
 
Protein sequence
MARKKHSSID EEAQIDMTPM LDIVFIMLIF FIVTTSFVKP SGLDYNKPKA SQATSKPSAN 
IFIGVSKTGV IMMENRQVDI ERVTANVERM LAEAPEAAVL IQADKDAMHG LVVKVLDQVK
AAGIDKISVS AGND