Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_1627 |
Symbol | |
ID | 5370140 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 1974640 |
End bp | 1975167 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640829825 |
Product | MotA/TolQ/ExbB proton channel |
Protein accession | YP_001365835 |
Protein GI | 153000154 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0811] Biopolymer transport proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.399285 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGCTAT ACCTGATGGA CATTTGGGAT TCCGTCAGGG GCTTCATGGC CTCCGGAGGC GACGTACTCT GGCTTGTAGC GGCTGTTCTG TTCTTAATGT GGGTATTGAT GCTTGAGCGT TATTGGTATC TTAATTGGAT ATCACCAAAG CAACATAAAG CAATCATAGC TGCATGGGAC GCCAGAGAGG AAACGACCTC TTGGTATGCA CACCGTATCC GTGAAGCTTG GATGTCCCAA GCGAAGCAAG ATTTGAATGC ACGTATGCTG ATTATTAAAA CCTTAGTGGC GATTTGTCCA ATGATAGGTT TGTTAGGTAC CGTAACCGGT ATGATTTCAG TGTTCGATGT GATGGCAGTT CAGGGGACGA GTAATGCTCG TTTGATGGCG GCTGGTATTT CAATGGCGAC TATGCCTACG ATGGCAGGTA TGGTTGCAGC ATTATCGGGA GTGTTCTTCA GTACTCGCCT TGATGCAAAA ATGAAGATCA GTTTAGAAAA GCTAAAAGAC AGCATGCCGC ACCACTAG
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Protein sequence | MMLYLMDIWD SVRGFMASGG DVLWLVAAVL FLMWVLMLER YWYLNWISPK QHKAIIAAWD AREETTSWYA HRIREAWMSQ AKQDLNARML IIKTLVAICP MIGLLGTVTG MISVFDVMAV QGTSNARLMA AGISMATMPT MAGMVAALSG VFFSTRLDAK MKISLEKLKD SMPHH
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