Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_1623 |
Symbol | |
ID | 5370590 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 1967810 |
End bp | 1970617 |
Gene Length | 2808 bp |
Protein Length | 935 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640829822 |
Product | TonB-dependent receptor |
Protein accession | YP_001365832 |
Protein GI | 153000151 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000685263 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATAAGA ACAACTTCTT AGCAAACTCA GTTCGCTTTG CTTTAATTGG TGGTGTCACA GTTGCTGCTT TAAACGCGCC AGTCGCAGTT GCTGCTGATG ATGGAGCTAA AAAAGTAGAA CGTATTGAAG TAACGGGTTC TCGTATCAAA CGAACGGATA TGGAAGCGGC TAGTCCAGTT TTAGTGATGA ATCGTGAAGA GCTTGAAGCA ACTGGTATGA TCAGTATTGG TGATATCTTA CAAACCATTC CAGCTGCGGG TTCTGCGCTA AATACTTCAT TCAACAACGG CGGTGATGGT TCAACTAACA TGGACCTACG TAACCTAGGA GCTCAACGCT TATTGGTGCT TGTCAATGGC AAGCGCTGGA TCTCCTCTTT AGGTTCAACA GTCGACTTAA ATACCATTCC TACATCTGCA ATCGAACGCA TTGAAGTCCT TAAAGACGGT GCTTCAGCTG TTTATGGTTC GGATGCTATT GCTGGTGTAA TTAACATCAT CACACGCAAG AATTTTGAAG GCGTTGAAGT TTCAGTTTAT GGTGGCCAAA ACGCAAAATA CGATGATGGC CGTCAATATA CTGCAGATAT TACCTTTGGC TCTGTATCTG AGAAAGGTGG CTTGTTATTC AATATGAGTC ATGTCACTCA GCAACCAATT TGGGCTGGCG ATAGGGATAT ATCAGCAACG GGTTATAGCT CAACGGCTGA TAATACACGT ATTCGAGTTA AAGGTTCACA GATGAACCAA GCCAACCAAG ATGCATTAGC TGCTGTGGGT TCACCAAACT CATCTGGCAT ATATGATTTT ATGGCGAAGG AAGGTACTGG TGTTAACGTA GGTGTTGATC AATTACGTCC GCGTACTGGT AGCGATGTAT ATAACTATGC ACCTGATAAT TATCTATCAA CACCTCAAAA TCGTAATTCT TTCTATGTAC AAGGTTTTTA TGATATTTCA GACAATTTAA GAGTTGTTTC TGACTTTATG ATGACCAACC GTAAGTCGTC TCAAGAATTA GCACCTATGC CGTTAACGTT AGGTGCATCA TTCGGTGCCG CAGCGAGTCG TGTTGATATT GGTGCAAATA ATATTTACAA CCCATTTGGT GAAACGCTAT ATGGCGATAG CGCTCGTGCA GCCGCAAACG GCCAAGCAGG ATATGTACCT TATGCATTAC AGCGTCGTAT GATTGAAGCT GGCTCACGTC AATATAATCA AAATGACACA ACCTATCGTG CAATGATCGG CTTAGAAGGC AATATTAACG ATAACTGGAC GTGGAGTGCT AACTACATTT ATGGTCAAAA TAATCAAGAT GTACTAACAA CTGGTCTTTT AAACTTAACG CGTATTAATC AAGCACTTAG CGATAACTGC GACGCAAGCA ATGGTTGTGT AGCATTAAAT CTATTTGGTG GACCAGGCAC CGTGACGCAA GATATGGTTG ATTACATTAC TTTTGATAGT GTTAGCCGTT CTGGTTTAAC GATGAAAGAT TATGCGTTCA ACATCTCTGG TGACTTATTC GATTTGCCAG CAGGTTCTGT TGGTATGGCT GTTGGTTTAG AGCGCCGTGA AGAATCTGGT TTTGATGTTC CAGATCCACT AACTGTTACA GGTGAGTCGT CAGGTAACCA ACGTGACGCA ACTGCGGGTG GTTTCCGTTT AGATGAAGCG TATGTTGAGT TATCAGTCCC TGTGTTAGAA AGTTTATTAA TTACGCCTGC AATACGTGTA TCTGACCATG ATGCGTATGG TAACAATACT ACTGGGAAAG TAGGTGTTGA ATATCGTCCA ATGGACGATA TGTTGCTTCG TGGTACCTGG GCTCAGGGCT ATCGTGCACC ATCTATTTCA GATCTTTATG CAGGTAATGC AGACTCTTAT CCAACATGGA CAGATCCATG TAATACTCCC TCAAGTGGAA CGATTGACCT AGTACAAAAC CCAGGCTGTG CGGGTGTACC TGATGGCTAT AAACAAGCAA ATACGCAGAT TCGAATTTCT CAGGTTTCGT CACCTGATCT GAAACCTGAA ACTTCAGAAT CTTATACATA TGGCGCAGTG TATAATCCAT CATGGCTTGA AGGTGCAGAG CTAACTCTTG ATTACTATAA TATTAAGGTA AAAGATGCGA TTGGTCGTTA TGGACATACA ACGATTGCAA GAGAGTGTGC TAAAGGTACT AATCCTGATT CATGTAATTA TATTGACCGT GATAGCTTAG GTAACATTAC TGACCTGCGT AACTTCCTGC AAAATGCCGG TGAATATAAT GTTGAAGGAG TTGACTTCTT TACTGCTTAT CGTTTCCCTG AAACCTCATT TGGTTCATTT AAAGCATCTC TGGATGTAGC TTATGTTATT TCAAATGAAT TTAATGGTAC TGATCGTGTA GGAGTTCAAA CTGGTGATGG CGGTTTCCCT GAGTTTAAGG GCAACTTAAT GGTTGATTGG TCGATGGGTG ATTGGGATGC GCATTGGAAA GTGCGTTATG TTGGCCCATT GAATAATGAT TATTATACAG GTTTAACGCC TGATGATATC GATTATTATA ACGACCTTAA AGATTCTGGC TATAGAGAGA CGATGGATGC TTATATGGTC CATAACGTAT CAGTTGGTTA CAATATTGAT GGCTACAATA CCAAAATTTC TTTAGGTATT AATAACCTAT TCGCTAAAAA ACCACAGGCT GAAGGTCCAA CTAACAACGA AGCCATTTCA ACGAATAACT TCTCTGTTAC TGAATATGAT GTAAATATGG ATCGTTTCAT CTACTTGCGC GCTACTACTA AGTTCTAA
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Protein sequence | MYKNNFLANS VRFALIGGVT VAALNAPVAV AADDGAKKVE RIEVTGSRIK RTDMEAASPV LVMNREELEA TGMISIGDIL QTIPAAGSAL NTSFNNGGDG STNMDLRNLG AQRLLVLVNG KRWISSLGST VDLNTIPTSA IERIEVLKDG ASAVYGSDAI AGVINIITRK NFEGVEVSVY GGQNAKYDDG RQYTADITFG SVSEKGGLLF NMSHVTQQPI WAGDRDISAT GYSSTADNTR IRVKGSQMNQ ANQDALAAVG SPNSSGIYDF MAKEGTGVNV GVDQLRPRTG SDVYNYAPDN YLSTPQNRNS FYVQGFYDIS DNLRVVSDFM MTNRKSSQEL APMPLTLGAS FGAAASRVDI GANNIYNPFG ETLYGDSARA AANGQAGYVP YALQRRMIEA GSRQYNQNDT TYRAMIGLEG NINDNWTWSA NYIYGQNNQD VLTTGLLNLT RINQALSDNC DASNGCVALN LFGGPGTVTQ DMVDYITFDS VSRSGLTMKD YAFNISGDLF DLPAGSVGMA VGLERREESG FDVPDPLTVT GESSGNQRDA TAGGFRLDEA YVELSVPVLE SLLITPAIRV SDHDAYGNNT TGKVGVEYRP MDDMLLRGTW AQGYRAPSIS DLYAGNADSY PTWTDPCNTP SSGTIDLVQN PGCAGVPDGY KQANTQIRIS QVSSPDLKPE TSESYTYGAV YNPSWLEGAE LTLDYYNIKV KDAIGRYGHT TIARECAKGT NPDSCNYIDR DSLGNITDLR NFLQNAGEYN VEGVDFFTAY RFPETSFGSF KASLDVAYVI SNEFNGTDRV GVQTGDGGFP EFKGNLMVDW SMGDWDAHWK VRYVGPLNND YYTGLTPDDI DYYNDLKDSG YRETMDAYMV HNVSVGYNID GYNTKISLGI NNLFAKKPQA EGPTNNEAIS TNNFSVTEYD VNMDRFIYLR ATTKF
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