Gene Shew185_1617 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1617 
Symbol 
ID5371365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp1955363 
End bp1956136 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content50% 
IMG OID640829817 
Producthypothetical protein 
Protein accessionYP_001365827 
Protein GI153000146 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.449373 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGAATTGT TACTCGAGCC CAGTCATTGG GCCCTGTTGG CAGTTATAGG TCTTATCGCT 
GGATTCATCG ATGCCGTCGT TGGCGGCGGT GGTCTATTGT CGATCCCCGC GCTGTTAACC
TTAGGCATTG CACCGCACAC CGTATTAGGT ACCAATAAGT TAGCCGCCAG TTTTGGCTCT
TCAATGGCGG CTTGGACCTA TTATCGCCAG CACCTTTTTA AACCCTCATT TTGGTACATG
GCCTTTATTG CCACCTTTAT TGGCGCCGTA TTGGGCAGTT TCTTAGTCTA TTTAGTCGAT
ACCCAATGGC TCGAAAAAGT CCTGCCGTTG CTGATCATTG GCATTGCCAT TTACAGTTTA
GTCAGCCCCA ATGCGATATC GGACGTTAAC TGCCAAGCCC CAACCAGCAA ACCACCCGCC
AAGCAACAAT GGCTACAGGG ACTTGCTTTA GGCACTTATG ATGGCTTTGC AGGCCCTGGC
ATTGGCGCGT TTTGGACTGT CACATCCGGC TCTTTGTATA AACTGCCTTT ACTACACAGC
TGCGGCCTCG CCCGTGCGAT GACCTTCACC AGCAACTTGA CCGCATTGAC TATCTTTGGC
TGGCTTGGGC AGGTAGAGTG GCAAATAGGT TTGTGGATGG GATTGTGCAT GATGTTAGGC
TCATTTATCG GCGCGCGCTG CGCGATTAAA TTTGGCATGC CCTTTATTCG TCCACTGTTT
ATTTTGATCG TGCTAATGAT TGCAGCAAAT TTGGCATGGA GCGCATGGTT GTGA
 
Protein sequence
MELLLEPSHW ALLAVIGLIA GFIDAVVGGG GLLSIPALLT LGIAPHTVLG TNKLAASFGS 
SMAAWTYYRQ HLFKPSFWYM AFIATFIGAV LGSFLVYLVD TQWLEKVLPL LIIGIAIYSL
VSPNAISDVN CQAPTSKPPA KQQWLQGLAL GTYDGFAGPG IGAFWTVTSG SLYKLPLLHS
CGLARAMTFT SNLTALTIFG WLGQVEWQIG LWMGLCMMLG SFIGARCAIK FGMPFIRPLF
ILIVLMIAAN LAWSAWL