Gene Shew185_1615 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1615 
Symbol 
ID5371391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp1954004 
End bp1954693 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content46% 
IMG OID640829815 
Producthypothetical protein 
Protein accessionYP_001365825 
Protein GI153000144 
COG category[S] Function unknown 
COG ID[COG3110] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAATCAC TTTTGCCAAT CAGCAGCCTG CTAGTATTAC TCGGTTCTGC TTCAGCCTTC 
GCCGCAGATC TCAACATTCC GATGTCATTT GAGTACCTTG CACTCGATGG TAAAAAAGTC
GAGTCTAGCG TGTTCAATCA TAAAAGCAGC TTAGAATTGA CACCTGGCAC TCATAAAATC
GCCATTCGTT ACCATGAGAT GGTAGAAGAC GATTTTAGCG ATAGCCAAAC CTTTGTTAAA
TCAGCCCCTT TCATCGTGAC CTTAGACGTT GATGGCGACT ATCAATATTA CCTCCAAGCC
GCCGAAGGCA AAGTCGTTAA AAAGCCAAAA GTTTACGCGC AAAACCCACA AATCAAATTG
ACCCGTGGCG ACAAAGGCGA TGTCAATTTC CAAGTGGTGA ATACCAATTT AGAAGAAGAA
AGCTTTGTGT CTCGCCTTTT CAGTGGTAAT CAAGCCGTTG ACGTTTCGGG AACTGCCGCA
GCAGCAACCG GTGCAGCAGG CGCTGTGGTT GCCGTTGCAC CAGCACCCGT GGCAACATCG
GCTACCGTTA GCGCAACCTC ACTCACAGCT CCCGTAGACA CTTCTAAAGC AACAGCTGCC
AATCCACAAC AAATGTTGCA ATACTGGTGG TTACAAGCGG ATGAGAAAAC ACGTAAAGAA
TTTATGAGCT GGGCAATTTC ACAGTTATAA
 
Protein sequence
MKSLLPISSL LVLLGSASAF AADLNIPMSF EYLALDGKKV ESSVFNHKSS LELTPGTHKI 
AIRYHEMVED DFSDSQTFVK SAPFIVTLDV DGDYQYYLQA AEGKVVKKPK VYAQNPQIKL
TRGDKGDVNF QVVNTNLEEE SFVSRLFSGN QAVDVSGTAA AATGAAGAVV AVAPAPVATS
ATVSATSLTA PVDTSKATAA NPQQMLQYWW LQADEKTRKE FMSWAISQL