Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_1614 |
Symbol | |
ID | 5371390 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 1953066 |
End bp | 1953974 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640829814 |
Product | histone deacetylase superfamily protein |
Protein accession | YP_001365824 |
Protein GI | 153000143 |
COG category | [B] Chromatin structure and dynamics [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGACTCTGA TCCCACTGGT TTATCACGCC AGCTATTCCA AGCTGGCGCT TCCTCCTCAT CACAGATTTC CCACGACCAA GTACGCGAAT TTACGGCAGT ACTTACTCGA GAATCAGCTT GCCACACCAG CCCAGTTCCA CACGCCAACG GCGATGACAG CGCAGGATGT AATGCAAGTG CATCAACGCG AGTACGTAGA GCAGTTTATC GCGGGCACTT TGCCAACAGC GGCGCTTAGA CGGATTGGTT TTCCGTGGAG TGAAGCCTTA GTTGAGCGCA CCTTGCATTC TGTGGCAGGC ACCACTCTCA CAGCTTCATT GGCCATTAAT CAGGGTATTG GCCTGCACCT AACGGGTGGC TATCATCACG CCCATTACGA TTTTGGCAGT GGCTATTGTA TTTTCAACGA TCTTATCCTC GCGGCCCAAA ATGCCATCGC GAGCCAGCAA GTGCACAAGG TACTGATTTT TGATTGCGAT GTGCATCAAG GTGACGGTAG TGCAACACTC AGCCAGCGAC ATCAAGGGAT AATCAGTTGC TCGATTCACT GCAAAGAGAA CTTCCCGAGT CGTAAGCAGC ATTCCCACCA TGATATTGAG CTAACCAAAG GCAGCGATGA CAATCTGTAT CTCGAAACCG TGGAGCAAAC ACTCGCCCTG CTCATTCGCA TCCATCAGCC AGATCTCATT CTTTATGATG CTGGGGTCGA TATCCATCAA AATGATGATC TCGGCTTGCT CAATATCAGT CAAGAAGGGC TGTTCAGACG GGATTTAACT GTGTTATCAA TGGCAAAATC GGAAAATATT CCAATTGCTG CCGTGATAGG CGGCGGCTAC AGCAGAGACG CACTACAATT AAGCCAAAGA CACAGCCAAC TTTTTATTGC GGCAAACCAT TTGTGGTAG
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Protein sequence | MTLIPLVYHA SYSKLALPPH HRFPTTKYAN LRQYLLENQL ATPAQFHTPT AMTAQDVMQV HQREYVEQFI AGTLPTAALR RIGFPWSEAL VERTLHSVAG TTLTASLAIN QGIGLHLTGG YHHAHYDFGS GYCIFNDLIL AAQNAIASQQ VHKVLIFDCD VHQGDGSATL SQRHQGIISC SIHCKENFPS RKQHSHHDIE LTKGSDDNLY LETVEQTLAL LIRIHQPDLI LYDAGVDIHQ NDDLGLLNIS QEGLFRRDLT VLSMAKSENI PIAAVIGGGY SRDALQLSQR HSQLFIAANH LW
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