Gene Shew185_1614 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1614 
Symbol 
ID5371390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp1953066 
End bp1953974 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content49% 
IMG OID640829814 
Producthistone deacetylase superfamily protein 
Protein accessionYP_001365824 
Protein GI153000143 
COG category[B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGACTCTGA TCCCACTGGT TTATCACGCC AGCTATTCCA AGCTGGCGCT TCCTCCTCAT 
CACAGATTTC CCACGACCAA GTACGCGAAT TTACGGCAGT ACTTACTCGA GAATCAGCTT
GCCACACCAG CCCAGTTCCA CACGCCAACG GCGATGACAG CGCAGGATGT AATGCAAGTG
CATCAACGCG AGTACGTAGA GCAGTTTATC GCGGGCACTT TGCCAACAGC GGCGCTTAGA
CGGATTGGTT TTCCGTGGAG TGAAGCCTTA GTTGAGCGCA CCTTGCATTC TGTGGCAGGC
ACCACTCTCA CAGCTTCATT GGCCATTAAT CAGGGTATTG GCCTGCACCT AACGGGTGGC
TATCATCACG CCCATTACGA TTTTGGCAGT GGCTATTGTA TTTTCAACGA TCTTATCCTC
GCGGCCCAAA ATGCCATCGC GAGCCAGCAA GTGCACAAGG TACTGATTTT TGATTGCGAT
GTGCATCAAG GTGACGGTAG TGCAACACTC AGCCAGCGAC ATCAAGGGAT AATCAGTTGC
TCGATTCACT GCAAAGAGAA CTTCCCGAGT CGTAAGCAGC ATTCCCACCA TGATATTGAG
CTAACCAAAG GCAGCGATGA CAATCTGTAT CTCGAAACCG TGGAGCAAAC ACTCGCCCTG
CTCATTCGCA TCCATCAGCC AGATCTCATT CTTTATGATG CTGGGGTCGA TATCCATCAA
AATGATGATC TCGGCTTGCT CAATATCAGT CAAGAAGGGC TGTTCAGACG GGATTTAACT
GTGTTATCAA TGGCAAAATC GGAAAATATT CCAATTGCTG CCGTGATAGG CGGCGGCTAC
AGCAGAGACG CACTACAATT AAGCCAAAGA CACAGCCAAC TTTTTATTGC GGCAAACCAT
TTGTGGTAG
 
Protein sequence
MTLIPLVYHA SYSKLALPPH HRFPTTKYAN LRQYLLENQL ATPAQFHTPT AMTAQDVMQV 
HQREYVEQFI AGTLPTAALR RIGFPWSEAL VERTLHSVAG TTLTASLAIN QGIGLHLTGG
YHHAHYDFGS GYCIFNDLIL AAQNAIASQQ VHKVLIFDCD VHQGDGSATL SQRHQGIISC
SIHCKENFPS RKQHSHHDIE LTKGSDDNLY LETVEQTLAL LIRIHQPDLI LYDAGVDIHQ
NDDLGLLNIS QEGLFRRDLT VLSMAKSENI PIAAVIGGGY SRDALQLSQR HSQLFIAANH
LW