| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1611 |
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| Symbol | |
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| ID | 5371690 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 1950342 |
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| End bp | 1951535 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640829810 |
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| Product | methionine gamma-lyase |
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| Protein accession | YP_001365821 |
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| Protein GI | 153000140 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | [TIGR01328] methionine gamma-lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGATG AGTCAGGCAA GATGTGGAAA GCGGCAACAC AGGTTATTCA TGGCGGCCAT
GAGCGTGAGG CTTTTGGCGC CTTAGTGACG CCGCTATATC AAAGTGCGAC TTTTGTGTTT
GAGTCGGCGC AGCAAGGTGG CGAGCGATTT GCGGGTAATG AGCAGGGGTA TATTTACACG
CGCTTAGGGA ATCCGACAAC CGCCGAGCTT GAACGTAAAA TGGCGATTTT AGAAGGTGCA
GAGGCTGCCG CTGCAACCGC ATCTGGTATG GGCGCAGTAT CTGCCGCATT ACTGGTTAAC
TTGCAGATGG GCGATCACTT AGTGGCATCC AATGCCGTAT ACGGCTGTAC TTATGCGCTA
ATGACGACTC AGTTCGCTCG CTTTGGTATT GAAGTGTCCC TAGTAGACTT TTCATCTTTG
GCAGACATAG AAGCGGCGAT TCAATCCAAT ACTAAGGTCA TTTTCTGTGA AACCCCAGTG
AATCCCCATT TACAGGTATT TGATTTAGCG GCAATTGCGA CTATTGCTAA ACGCCACCAG
TTGGTCAGTA TTGTCGATAA TACCTTTATG ACTCCATTAC TACAGCGGCC GCTAGATTTT
GGTATCGACT TGGTGATCCA CAGTGCGACT AAATATCTCA ATGGTCATGG CGATGTGATT
GCGGGGATAG TGTGTGGCAG TGAAGAGCAG CTCCATAAAG TGAAGTATGA AATCTTAAAA
GATATTGGCG CTGTGATATC GCCACACGAT GCTTGGCTGA TCTTGCGTGG CCTTAAAACC
TTAGATGTGC GCTTACAGCG CCATTGCGAT AGTGCCCAGC GCGTGGCAGA ATTTTTGGCC
GAACATCCTA GTATTAATCG CGTGTATTAT CCAGGACTTG CCTCTCACCA AGGGCATAAA
TTTATTGGTA AGCAGATGAA ACGTGCCGGT GGCGTGATTG CGTTTGAACT GGCGGCAAAT
TTAGAAGAAG CCATGGCCTT TGTGGGGCAT TTAAGTTTGT TCTCTATTGC GGTGAGCCTA
GGCGATGCAG AATCCCTCAT TCAACATCCT GCGTCGATGA CGCACTCTCC CTACACGCCA
GAGGCTAGGG CGGCGGCAGG CATTGGTGAC AATCTGCTGC GAATTTCTAT TGGCTTAGAA
GATTGTGACG ACATTATCGC TGACTTAAGT CAGGCGTTAG CGCGTTTAGC TTAA
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| Protein sequence | MQDESGKMWK AATQVIHGGH EREAFGALVT PLYQSATFVF ESAQQGGERF AGNEQGYIYT
RLGNPTTAEL ERKMAILEGA EAAAATASGM GAVSAALLVN LQMGDHLVAS NAVYGCTYAL
MTTQFARFGI EVSLVDFSSL ADIEAAIQSN TKVIFCETPV NPHLQVFDLA AIATIAKRHQ
LVSIVDNTFM TPLLQRPLDF GIDLVIHSAT KYLNGHGDVI AGIVCGSEEQ LHKVKYEILK
DIGAVISPHD AWLILRGLKT LDVRLQRHCD SAQRVAEFLA EHPSINRVYY PGLASHQGHK
FIGKQMKRAG GVIAFELAAN LEEAMAFVGH LSLFSIAVSL GDAESLIQHP ASMTHSPYTP
EARAAAGIGD NLLRISIGLE DCDDIIADLS QALARLA
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