Gene Shew185_1609 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1609 
Symbol 
ID5371822 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp1947255 
End bp1948715 
Gene Length1461 bp 
Protein Length486 aa 
Translation table11 
GC content49% 
IMG OID640829808 
Productprotein of unknown function DUF463 YcjX family protein 
Protein accessionYP_001365819 
Protein GI153000138 
COG category[R] General function prediction only 
COG ID[COG3106] Predicted ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAATGC TTGATGCCTC GCTCCATAAA ATAACCCAAA AGGGCCAATC CCTGTTACAT 
CGCACCGCGG ACCGGCATTT ACGTTTGGCC GTGACTGGGC TTTCTGGTGC GGGAAAAACC
GCGTTTATCA CAGGGTTAGT CAATCAGTTA CTCAATTCTG GACCAGTCTC AACCTCATCC
CACACCCGCA ACAACAGCGC TTTGCCATTG TGGCAGGTGA GCCGTGAGCA GCGTTTGCTC
GGGGTTAAGC GTGCCATGCA GCCAGATCTG GAAATCGCCA GTTTTGATTA TCAAGGTGCC
ATGTTAGCGC TCACTTCCGA ACCCGCGACT TGGCCAGCCT CTACTCGCAC TATTTCTGAA
TTACGTTTGG CGATTAAATA CCGACCGCAA AAGGGCTTAT TGGCCAAGTT TTCTGATACC
GCCACACTGT ACTTGGACAT AGTCGATTAT CCCGGCGAAT GGTTACTCGA TTTACCTATG
CTGCGCCAAG ACTTTGTTAC TTGGTGTCGT GCGCAACAAG TTCGCATCGA GCATCTTAAA
AGCTCACCCT TGTATGCTGA GTTTGAACAA TCTTTGATGT CATTGGATTT AGCCGCCAGC
GCCGATGAGC AGCAATTAAA GCGGATTGCC GATCAATATC AGTTATTACT CAATGATTTA
GTGCACGTGC AAGGTTATTA CCAAGCGCAG CCTGGGCGCA TGTTATTGCC GGGTGAATGG
CAGGGCGCTC CCTTATTGGC TTTTTTCCCC CTGTTATTGG TCAATGATGA AAAGTTCGCA
GCGCTTTCGC AAAGCGATAA ACACAGTGGA TTTCATGTAC TGGAAAAACG CTATCAAGAA
TACGTCGCTA AAGTGGTTAA GCCTTTCTAT AAAAACCACT TTGCCGGTTT TGATCGGCAA
CTCGTGTTAG TTGACTGCTT TAGTGCGTTG AATCGCGGTA AAAAGCAATT TGAGGATATG
GGGGCGGCGC TCAATGCCAT TATGGAAAGC TTTCAGTTTG GCCAATCGAG TTATTTACGG
CGTTTATTTT CTCCCCGTAT CGACCGTTTA TTGTTTGCCG CGAGCAAGGT TGACCATGTT
ACCCGCGATC AGCAGAGCCA TGTTTTGTCC CTGCTGACCG ATATGTTGAA ACACAGCCAG
CATTTTGCCA GTTTTGATGG TTGCAAAGTG GAGACGATGG CGATTAGCGC CATCAAGGCG
ACTCGCCACG GCATGGTGAC GACCCAAGAG GGCGAGGTCG AAGTTGTGCA GGGGACGGGA
CTCAATGGCA AAGCCCTGAC CTTGTTTCCA GGGGAAGTGC CCACTCGCTT ACCTGACCCC
GATTTTTGGC GTGATCAAGG GTTTAACTTT GTCGGCTTTG CGCCGCCGAA CAATGTGAAT
GTTGACCCCT CTCAAGTGCA CTTTGACCAT ATTCGTCTCG ATCATCTGTT GCAGTACTTA
CTGGGAGATA AGTTGGAATG A
 
Protein sequence
MGMLDASLHK ITQKGQSLLH RTADRHLRLA VTGLSGAGKT AFITGLVNQL LNSGPVSTSS 
HTRNNSALPL WQVSREQRLL GVKRAMQPDL EIASFDYQGA MLALTSEPAT WPASTRTISE
LRLAIKYRPQ KGLLAKFSDT ATLYLDIVDY PGEWLLDLPM LRQDFVTWCR AQQVRIEHLK
SSPLYAEFEQ SLMSLDLAAS ADEQQLKRIA DQYQLLLNDL VHVQGYYQAQ PGRMLLPGEW
QGAPLLAFFP LLLVNDEKFA ALSQSDKHSG FHVLEKRYQE YVAKVVKPFY KNHFAGFDRQ
LVLVDCFSAL NRGKKQFEDM GAALNAIMES FQFGQSSYLR RLFSPRIDRL LFAASKVDHV
TRDQQSHVLS LLTDMLKHSQ HFASFDGCKV ETMAISAIKA TRHGMVTTQE GEVEVVQGTG
LNGKALTLFP GEVPTRLPDP DFWRDQGFNF VGFAPPNNVN VDPSQVHFDH IRLDHLLQYL
LGDKLE