| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1606 |
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| Symbol | |
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| ID | 5371961 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 1945828 |
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| End bp | 1946511 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640829805 |
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| Product | phage shock protein A, PspA |
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| Protein accession | YP_001365816 |
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| Protein GI | 153000135 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1842] Phage shock protein A (IM30), suppresses sigma54-dependent transcription |
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| TIGRFAM ID | [TIGR02977] phage shock protein A |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGAATTT TCTCTCGTTT CGCCGATATC ATTAACTCTA ATATCAGCGC ATTGCTGGAT
AAAGCCGAAG ACCCAGAAAA AATGGTTCGA CTGATTATCC AAGAAATGGA AGACACACTC
GTTGAAGTAC GTTCTACCTC AGCTAAAGTG TTAGCTGAAA AGAAAGAGCT GCAACGTCGT
ATCAACCGCG TGTTAGAGCA AGTGCAAGAT TGGCAAGATA AGGCTGAACT GGCACTGTCC
AAAGACCGTG AAGACTTAGC GAAAGCCGCT TTAGTTGAAA AACAAAAAGC GACCGGTTTA
GCAGACACGC TGAATCAAGA GTTAGCCGTT ATCGATGAAC ATATCGCACG CTTGAAAGAT
GAAGTGGGCA TGTTGCAAGA AAAGCTGCTC GATGCAAAAG CGCGCCAAAA GACCATTATT
TTGCGCACTC AAACAGCGTC ATCACGCTTA GAAGTGAAAA AGCAGTTAGA TTCAAGCAAG
ATCGACAACG CTATGCTCAA GTTTGAGCAA TATGAGCGCC GCGTCGAAGG CTTAGAAGCC
CAAGTTGAAT CTTACGATCT TGGCAGCAAA AAAACCTTAG CCGATGAGTT TGCGGCGCTA
GAAGCGGAAG ATTCTGTGAA TGCAGAACTG GCAGCGCTAA AAGCCAAGGT AAAAGGTAAA
GCGCCAACTA AGTCAAAAGA ATAA
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| Protein sequence | MGIFSRFADI INSNISALLD KAEDPEKMVR LIIQEMEDTL VEVRSTSAKV LAEKKELQRR
INRVLEQVQD WQDKAELALS KDREDLAKAA LVEKQKATGL ADTLNQELAV IDEHIARLKD
EVGMLQEKLL DAKARQKTII LRTQTASSRL EVKKQLDSSK IDNAMLKFEQ YERRVEGLEA
QVESYDLGSK KTLADEFAAL EAEDSVNAEL AALKAKVKGK APTKSKE
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