| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1603 |
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| Symbol | |
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| ID | 5372165 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 1941833 |
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| End bp | 1942864 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640829802 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001365813 |
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| Protein GI | 153000132 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.31909 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTAAAT ACCTACTGCG CCGCCTCAAT TTGTTCCTTG CCACCTCGTT AGTCATGGTG
GGTGTCTTAT TTTACGCCAC GGGCTTATTT CCGGTAGATC GCACCCACGC ACTCACCGGC
ATACATACAC CGACGGCGAG TCAACTGGTT CAAATCGAGC AGGACTACAA ATTAGATAAA
AACCAAGCGT GGCAATTTAT CGCTTATCTA CAACAAAGGC TTAGTGGTAA TTTAGGCATT
TCAGTCACCT CACATCAAGA AGTGGCTGAA GAACTCAGCG CCGTCCTACC CGCCTCCTTC
GAACTTGCTG TGATGGCGGC CATTATCGCG ATTTGCTTTG GTGTGCCCTT AGGCGTGCTT
GCTTCCCAGA GCCAACATAA GCTCACCCAA AATACCATTA TGGCGATCAC GCTAACGGGC
TACTCTGTGC CCGTGTTCTG GTTAGGTCTT TATCTTTCGC TCTGGTTTGG TGTCGATCTC
GGTTGGTTAC CGATTTCTGG CCAAATCAAT TTGTTATATG AAATCAAACC TGTCACTGGC
TTTATGTTGG TAGATACCCT GTTGTCAGAG TCTGAATACG GCATGTCGGC ATTTAAAGAT
GCGCTGCTGC ACATCATTTT GCCTGCCACG ACACTGGCCG TGTTACCTTT TACTGTGGTG
GTTCGCAGCA CGCGATCGGC GATGATGAAT GTGATGAATC AAACCTTTAT CCGCGCCGCC
GAAGCCAGAG GAATGCATAC CGGGACTATT ATACTGCGCC ACGCCCTACC TAACGCCTTG
ATCCCCGTGC TGAAACATTT AGGGTTAATG CTAGGTTCCT TTGCCAGTTA TGCCATAGTG
GTCGAAATGA TTTTCTCTTG GCCTGGCGTG GGGTCTTGGC TGGTGTCAGG GATTTACCAA
CGGGACTACA CTGTCATCCA AGGTGGTATT TTGGCCGTAG CCCTATTAAT TATCTTCCTA
AGTATCTTGA TTGAAGTGCT GCATACAGTC TTTAATCCAC TGAGCAGAAA AGACCTTTAT
GCCACCAGTT AA
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| Protein sequence | MFKYLLRRLN LFLATSLVMV GVLFYATGLF PVDRTHALTG IHTPTASQLV QIEQDYKLDK
NQAWQFIAYL QQRLSGNLGI SVTSHQEVAE ELSAVLPASF ELAVMAAIIA ICFGVPLGVL
ASQSQHKLTQ NTIMAITLTG YSVPVFWLGL YLSLWFGVDL GWLPISGQIN LLYEIKPVTG
FMLVDTLLSE SEYGMSAFKD ALLHIILPAT TLAVLPFTVV VRSTRSAMMN VMNQTFIRAA
EARGMHTGTI ILRHALPNAL IPVLKHLGLM LGSFASYAIV VEMIFSWPGV GSWLVSGIYQ
RDYTVIQGGI LAVALLIIFL SILIEVLHTV FNPLSRKDLY ATS
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