| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1602 |
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| Symbol | |
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| ID | 5372518 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 1940956 |
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| End bp | 1941846 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640829801 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001365812 |
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| Protein GI | 153000131 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG4171] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.381943 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCACCAG TTAAAATTTA TCAAGAAGAT CAGATTGCCT CACCGACTAT GCGGGTTTGG
CTTAACTTTT CGGCTAATCC TTTCGCCTTG GCAGGTCTGT GGACAATTGC TTTCCTGCTC
TTGCTAACGC TATTTGGTCC TATGATTGCG CCCTTCCCAC CAGAGGCACA AGATCCCAGA
GCCTTGCTAT TGCCGCCCTC TTGGGATCCC TCAGGCACTG TGGCACACTT TTTAGGCACA
GACGATTTAG GCCGCGATAT CTTCAGCCGA TTATTACACG GCGCGCACTT GACCTTTGGT
ATGGCGCTGC TGATCGTCGT CACCGCATTA TTCACAGGCT TTATTATAGG ATCACTGTCG
GGCATGATGC GGGGCTTAAA ATCCAGTATC CTCGGGCACT TACTCGATGC GCTGTTATCC
ATTCCCTCAT TATTGATGGC CATTTTAGTG GTGGCGGTAA TGGGGCCAGG ACTTGAAAAT
GTGTTCTGGG CCGTCGGGAT AGCGTTAACC CCGCAATTTG TGCGCTCGAT ACACCAATCA
GTGCATGAAG AGTTGCAAAA AGAATACGTC ACAGCGGCGC GTTTAGATGG CGCGAACTCA
ATGCAAATTT TTTGGTATGT CATCATGCCA AACGTGTGGG AAGTGGTGAT CATTCAAACC
ACACTTGCCA TTTCGGCCGC CATTTTAGAT ATCGCAGCCC TCGGTTTTTT AAGCTTGGGG
GCGCAGGCAC CAAGCCCTGA ATGGGGCGCT ATGGTCGCCC AAGGTATGGA TAATTTATTA
ACGGCGCCTT GGGCTGTAAC TATCCCGGGC TTAGCGATTC TTTTCAGTGT GCTTTCCATT
AACTTGGTTG GCGATGGCCT ACGGTCGGCG CTTGCGCCCA TCAGAAACTA A
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| Protein sequence | MPPVKIYQED QIASPTMRVW LNFSANPFAL AGLWTIAFLL LLTLFGPMIA PFPPEAQDPR
ALLLPPSWDP SGTVAHFLGT DDLGRDIFSR LLHGAHLTFG MALLIVVTAL FTGFIIGSLS
GMMRGLKSSI LGHLLDALLS IPSLLMAILV VAVMGPGLEN VFWAVGIALT PQFVRSIHQS
VHEELQKEYV TAARLDGANS MQIFWYVIMP NVWEVVIIQT TLAISAAILD IAALGFLSLG
AQAPSPEWGA MVAQGMDNLL TAPWAVTIPG LAILFSVLSI NLVGDGLRSA LAPIRN
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