| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1601 |
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| Symbol | |
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| ID | 5372517 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 1939945 |
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| End bp | 1940952 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640829800 |
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| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
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| Protein accession | YP_001365811 |
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| Protein GI | 153000130 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG4170] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0781945 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTTTAC TCGACGTACG AAATCTCACG ATTGAACTCG ATACGCCCCA CGGTAGAGTG
CGGGCGCTCG AAAAAGTCAG CTTAACGCTC AATGCCGGCG AAATTCATGG CCTAGTCGGT
GAGTCAGGCT CTGGACGAAG TTTATTAGCC AGAGCGATTC TTGGGATCCC AGGTCCCAAC
TGGACCATCA CAGCCGATCG CATGATGTGG GATGGCAATA ACTTGATGGC TATGAGCTCA
AAAGAGCGCC GCAATCTAAT GGGTTCAGAC ATGGCGATGA TCTTCCAAGA TCCATCGGGC
AGCTTAGATC CGGCGCAAAC CGTCGGCAGT CAGCTGATGC AAGCTATGCC TAAGAATCCC
AATGCCTATT TTTGGCAAAA ACGTCGACAT GCACGGCTGA CAGCGCAAAA ATGGCTGCAT
AAAGTCGGGA TTAAAAATCC TCGACAGGTA ATGTCTAGCT ATGCGTGGGA ATTATCCGAA
GGCGAATGCC AAAAGGTGAT GATTGCGATG GCGGTTGCTA ATCAGCCTCG CCTCTTGATT
GCCGATGAAC CCACAAGCTC GATGGAGCTC AGCACTCAAG CGCAGATATT CAGATTATTA
TCTCAATTAA ATCAATTACA AAATGTATCG ATTCTATTGA TCAGCCACGA GCTTGAAACC
TTAGCCCAAT GGTGCGATCA CTTATCCGTG CTCTATTGCG GTCAGGTTAT GGAATCAGGG
CCGACAGACG AAGTGATTAA GCAGCCTTAT CATCCTTACA CTAAGGCGCT GCTTGACAAC
ATGCCCGACT ATTCAGGCTC AGGTGGCCAC AAGGCGATTA TGCCTACCCT TCCAGGGTCT
GCGCCTGCCT TACAGCATTT GCCAATCGGT TGCCGCTTAG GGCCTCGTTG CCCCGAAGCC
CAAAAAAAAT GCGTTAATCA GCCAAATTTA AGTCATATTA AAGACCGCTA TTTTGCCTGT
CATTTCCCTT ATCACGGCGA AACCCACAAT GACGACCCCA CTGCTTAA
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| Protein sequence | MPLLDVRNLT IELDTPHGRV RALEKVSLTL NAGEIHGLVG ESGSGRSLLA RAILGIPGPN
WTITADRMMW DGNNLMAMSS KERRNLMGSD MAMIFQDPSG SLDPAQTVGS QLMQAMPKNP
NAYFWQKRRH ARLTAQKWLH KVGIKNPRQV MSSYAWELSE GECQKVMIAM AVANQPRLLI
ADEPTSSMEL STQAQIFRLL SQLNQLQNVS ILLISHELET LAQWCDHLSV LYCGQVMESG
PTDEVIKQPY HPYTKALLDN MPDYSGSGGH KAIMPTLPGS APALQHLPIG CRLGPRCPEA
QKKCVNQPNL SHIKDRYFAC HFPYHGETHN DDPTA
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