| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1600 |
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| Symbol | |
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| ID | 5372793 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 1939179 |
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| End bp | 1939964 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640829799 |
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| Product | ABC transporter related |
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| Protein accession | YP_001365810 |
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| Protein GI | 153000129 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG4167] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00484848 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGACCC CACTGCTTAA AGTTAACGAT CTTTATAAAA GATACGATAC CGGTTATCGA
GGCTTTTCCC GCCAATATAA CGATGCATTA GCGCCCGTAT CCTTCGAGCT CCAGCGCGGC
GAAACCTTAG CCATAGTGGG TGAAGCGGGT TCGGGTAAAA GTACCTTAGC CCGCATTTTG
GTCGGTGCTG AGCCCCGCAG CGGCGGCGAG ATTTTTTTCG AAGGTGAAGC CTTAGACAGC
CGCGATATCA AGCAAAGATG CCGCTTGATT CGAATGATTT TCCAAGATCC GAATACCTCA
CTAAACCCGC GTTTGACAAT TGGCCAGTTG CTCGATGAGC CGCTGCGTTT TAATACCAAA
ATGTCGGCGC AATCGCGGCA CACCCAAGTG GTCGACACAT TGCGTAAAGT GGGCTTATTA
CCTGAGCATG CGGAGTTTTA TCCGCACATG ATTTCCGAAG GCCAGAAACA GCGCGTTGCG
GTAGCGCGAG CCTTAATGCT CAATCCTAAA ATTATTATTG CCGACGAAGC CTTGACCGCG
CTTGACCTTT CAGTACGCTC ACAAATTCTT AATTTGCTGC TGAAACTGCA AAAAGACCTC
GGCTTGTCTT ATATCTTCGT ATCCCATAAT CTCAATATTA TTCGCCATGT TAGCGATAAA
ATCATGGTGC TGCACAAAGG TGTTATGGTC GAGAAAGCGC CTACAGAACA GATATTTAAC
TCGCCACAAC ATGAATATAC CCAGAGGTTG ATCCAAGAGC AAAGTCTGTT TGTCCATAAA
CGTTAA
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| Protein sequence | MTTPLLKVND LYKRYDTGYR GFSRQYNDAL APVSFELQRG ETLAIVGEAG SGKSTLARIL
VGAEPRSGGE IFFEGEALDS RDIKQRCRLI RMIFQDPNTS LNPRLTIGQL LDEPLRFNTK
MSAQSRHTQV VDTLRKVGLL PEHAEFYPHM ISEGQKQRVA VARALMLNPK IIIADEALTA
LDLSVRSQIL NLLLKLQKDL GLSYIFVSHN LNIIRHVSDK IMVLHKGVMV EKAPTEQIFN
SPQHEYTQRL IQEQSLFVHK R
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