| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1593 |
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| Symbol | clpP |
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| ID | 5373071 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 1930240 |
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| End bp | 1930848 |
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| Gene Length | 609 bp |
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| Protein Length | 202 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640829792 |
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| Product | ATP-dependent Clp protease proteolytic subunit |
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| Protein accession | YP_001365803 |
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| Protein GI | 153000122 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
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| TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000000229052 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCATAATG CGTCAGACAT ACAAAGTGCT TTAGTGCCTA TGGTGATCGA ACAGACTGCT
AAGGGTGAAC GCTCATACGA TATTTATTCT CGTTTGTTGA AAGAGCGGAT TATCTTTTTG
GTAGGTCAAG TTGAAGAACA CATGGCAAAC CTTATCGTGG CGCAACTATT ATTCTTAGAA
TCAGAAAGCC CAGATAAAGA TATCTTTTTA TACATTAACT CTCCAGGTGG CTCAGTCACC
GCAGGCATGG CGATTTATGA TACCATGCAG TTTATCAAAC CGAATGTTAG CACTGTCTGT
ATCGGCCAAG CGGCCAGCAT GGGCGCTTTC TTATTAGCCG GTGGTGAGAA GGGCAAACGT
CACTGTTTAC CAAACTCTCG CGTGATGATC CATCAACCAC TGGGTGGTTT CCAAGGTCAA
GCTTCTGACA TCGCTATCCA TGCCAAAGAA ATCTTAGGCA TTAAGAATAA GCTTAACCAA
ATGTTAGCCG AGCACACTGG CCAACCGCTC GAAGTGGTTG AACGCGATAC CGATCGTGAC
AACTTCATGA GCGCGACTCA AGCCGTCGAA TATGGCTTAG TTGATTCTGT GATGACGAAA
CGCGGCTGA
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| Protein sequence | MHNASDIQSA LVPMVIEQTA KGERSYDIYS RLLKERIIFL VGQVEEHMAN LIVAQLLFLE
SESPDKDIFL YINSPGGSVT AGMAIYDTMQ FIKPNVSTVC IGQAASMGAF LLAGGEKGKR
HCLPNSRVMI HQPLGGFQGQ ASDIAIHAKE ILGIKNKLNQ MLAEHTGQPL EVVERDTDRD
NFMSATQAVE YGLVDSVMTK RG
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