Gene Shew185_1588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1588 
Symbol 
ID5369631 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp1924088 
End bp1924810 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content47% 
IMG OID640829784 
ProductUDP-2,3-diacylglucosamine hydrolase 
Protein accessionYP_001365798 
Protein GI153000117 
COG category[S] Function unknown 
COG ID[COG2908] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR01854] UDP-2,3-diacylglucosamine hydrolase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000609935 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGAACTT TATTTATAGG CGATCTGCAC CTGAGTGCAG ATCGTCTTGA TATCACCCAA 
GCGTTCACTC GCTTCCTCGA CACTGAGCTC GATGATGCCG ACGCCCTTTA TATCCTAGGT
GATTTGTTTG AAGTCTGGGT TGGCGATGAT ATTGCCTTGC CTTTTGCCCT CGAACTCGCC
GAAAAACTCA AGCAAGTATC GCAAAAGCTA CCGGTGTATT TCATCCACGG TAACCGTGAC
TTTATGTTAG GCAAGCAATT TGCGCGCGCC GCAGGAATGC AAATCTTACC CGAAGTGACG
TGCCTGAATT TATACGGCGT AGAGACGGTT ATCTTACACG GCGACAGCTT GTGTACTTTA
GATAAAGCCT ACCAACGCTT TCGAAAACTG CGCAGTTTGT CACTGGCGCG TTGGCTATAT
GGTTGTTTAT CCAAGAAAAC TCGTCAGGGC ATTGCCGATA AAATTCGCAG CAATAGCAAA
AGCAGCAATC AGCAAAAAAG CTACACCATC ATGGATGTGG AGCCCAATGC GGTCGATGCG
TTATTTGCCA AGACCCACAC CAAACATATG ATCCACGGTC ATACCCATAG ACCCGCCATT
CATCTACTTG CTAATGACTG TCAACGTATT GTGGTTGGCG ATTGGTATGA GCAAGGGAGT
GTGCTGAGTG TGAGCGCCGA AGGGATTAAC TTACAGTCCT TACCCTTCGA GCATACAACT
TAA
 
Protein sequence
MRTLFIGDLH LSADRLDITQ AFTRFLDTEL DDADALYILG DLFEVWVGDD IALPFALELA 
EKLKQVSQKL PVYFIHGNRD FMLGKQFARA AGMQILPEVT CLNLYGVETV ILHGDSLCTL
DKAYQRFRKL RSLSLARWLY GCLSKKTRQG IADKIRSNSK SSNQQKSYTI MDVEPNAVDA
LFAKTHTKHM IHGHTHRPAI HLLANDCQRI VVGDWYEQGS VLSVSAEGIN LQSLPFEHTT