| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1579 |
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| Symbol | |
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| ID | 5373803 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 1909742 |
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| End bp | 1911934 |
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| Gene Length | 2193 bp |
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| Protein Length | 730 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640829775 |
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| Product | decaheme cytochrome c |
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| Protein accession | YP_001365789 |
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| Protein GI | 153000108 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03507] decaheme c-type cytochrome, OmcA/MtrC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00874065 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAAAC GGTTCAATTT CAATGCCGCA ACAAAAGCGA TGTTGGGTGC CGGTTTACTC
TCTCTACTAC TCGCCGGTTG CGGTGGTAGT GACGGTAAAG ATGGTGAAGA CGGTAAACCG
GGTGTTGTTG GTGTCAATAT CGATACAACT CCTACACTGA AAGCAAGTTT CACTAATGCC
ACTATCGATG CAGGTAAGGT TACAGTCGAT TTCACATTAG AAAATGCGAA TGGCGTAGCA
GTACTAGGCT TAAATAAAGA TCACGACATA CGTTTTGGTA TTGCACAGCT TAGCCACGTT
ACAGTAGCAA CTGAGGATCC AGCCAAACCC GCTGACCGCG GTTACCAATG GCAAGCTTAT
ATCAATGCCA AAAAAGAGCC TGGCACAGTG CCTTCTGGCG TGGATAACCT CAATCCATCA
GCTCAATATC AAGCCAACGT TGAAGCCGCT GCCAAGTGTG ATACCTGTTT AGTGGATCAT
GGTGATGGTA ACTACAGCTA TACCTATCAA GCCAATATCG CCAATGTCAC TGAACCCTTA
GCGATTACTT ACAGTGCTGA AGCGACTCAA CGGGCAACAT TAGAACTTGA ATTACCACAA
CTTGCTGCCA ACGCACATTT TGATTGGCAA CCTTCTACAG GCAAAACTGA AGGTATTCAA
ACACGCAACG TTGTTTCAAT AACAGCCTGT TATACCTGTC ACCAACCAGA AAGTTTGGAG
CTACACGGTG GCCGTAGAGT TGATATTGAG AACTGTGCAT CTTGTCATAC GGCAACCTCT
GGCGATCCTG AGTCAGGTAA TAGCATTGAA TTTACATACA TGATCCATGC TATCCACAAA
GGTGGCGAAC GTCATACCTT TGATGAGACA GGCGCTGAAG TACCAGCCCC TTACAAGATT
GTCGGTTATG GTGGCAAAGT AATTGACTAC GGCAAGGTTG GTTTCCCATT AAAACCTGCA
GCGGATTGCG CAGCCTGTCA CGTTGAAGGA GCGGGTGCAC CAGCTAATGC CGATCTATTT
AAAGCCGACT TAAGCAATCA AGCCTGTATT GGTTGCCACA CAGAAAAACC GTCTGCTCAC
CACAACAGCA GTGATTGTGT CGCTTGTCAT AATGCAACTG AACCATACAA TGGCACAGGT
AGTGCAGCTA AACGTCATGG TGATGTGCTG AAAGCTTACA CAGAAACTAA AGCCATGGGC
ATTAAGTTCA CTAATGTCGG CGTGAATGAC ACGGGCAAAA TCACTTTTGA TGTCCAAGTT
GTTGACAAAG ATGGCAATGC CATTGATAAA GCCTTCGTAA ATCAAAGCTC ACGCGTTGTC
GTAGCATGGG ATTCTGATAA AGATTACCCA AGCTATGCTG ATGCCTCTTA TAGCAATCGT
CGTATCGCTT TAAGTGAAGG TACCTATAAT GAAGCGAATA AAACCTACTC ATTAACAGGC
ACTAAGTTCA GTTTACCCGC TGATGCAAAT GGTAAAACAT TCGAGCTGTG GTCAACATTA
GAAGTGTGCT TCAACAATGG CGGTTATGGC ATTGCTGACG TAGCTATGAC AGATTGCTCT
GCTGACAGTG TAAGTAAAGT CGCGGTTAAA CAAGCCCCAT ATCATTTCGT TTGGAAAGAT
ACGGGAGTGG ACAACACTGC CAAGGCAGCG ACACGTCGCG ACATTATTGA TGCAACTAAG
TGTCAAGGTT GTCACAATCA AGAAATCCAC CACTATGACA ACGGTGTAAA TTGCCAAACT
TGTCATACTT CGGATAAAAC CTTGAAAAGT GATGCCAACT ATCCTGGCGG TAAGATCCCA
ACTAGCTTCG CGTGGAAAGC TCACGAACGT GAAGGTCATT ACCTGAAATA TGCGGGTGTA
CAATCAGGCA CAGTGCTAAA AACCGATTGT GCGACATGCC ATACAGTTGA TAAAGCAAAC
GTCATTACAG GTATTGCCTT AGGACGTCAG CCTAATCGCA CATGGCGCTA CGGTGATATC
AATAATAACG GTGCCGATAT TTGGGTATCT TCAGATGCGG GTGCATGTTT AAGCTGTCAC
CAAAAATATC TGACTGATGC GACAAAATCT CACATTGAGA CTAACGGTGG TATTTTAAAT
GGCAGTAGTG CAGCCGATGT GCAAACTCGT GCATCAGAAA GCTGTGCAAC TTGTCATACC
CCAGCTCAAT TAAGTAAAGT TCACGGTAAT TAA
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| Protein sequence | MMKRFNFNAA TKAMLGAGLL SLLLAGCGGS DGKDGEDGKP GVVGVNIDTT PTLKASFTNA
TIDAGKVTVD FTLENANGVA VLGLNKDHDI RFGIAQLSHV TVATEDPAKP ADRGYQWQAY
INAKKEPGTV PSGVDNLNPS AQYQANVEAA AKCDTCLVDH GDGNYSYTYQ ANIANVTEPL
AITYSAEATQ RATLELELPQ LAANAHFDWQ PSTGKTEGIQ TRNVVSITAC YTCHQPESLE
LHGGRRVDIE NCASCHTATS GDPESGNSIE FTYMIHAIHK GGERHTFDET GAEVPAPYKI
VGYGGKVIDY GKVGFPLKPA ADCAACHVEG AGAPANADLF KADLSNQACI GCHTEKPSAH
HNSSDCVACH NATEPYNGTG SAAKRHGDVL KAYTETKAMG IKFTNVGVND TGKITFDVQV
VDKDGNAIDK AFVNQSSRVV VAWDSDKDYP SYADASYSNR RIALSEGTYN EANKTYSLTG
TKFSLPADAN GKTFELWSTL EVCFNNGGYG IADVAMTDCS ADSVSKVAVK QAPYHFVWKD
TGVDNTAKAA TRRDIIDATK CQGCHNQEIH HYDNGVNCQT CHTSDKTLKS DANYPGGKIP
TSFAWKAHER EGHYLKYAGV QSGTVLKTDC ATCHTVDKAN VITGIALGRQ PNRTWRYGDI
NNNGADIWVS SDAGACLSCH QKYLTDATKS HIETNGGILN GSSAADVQTR ASESCATCHT
PAQLSKVHGN
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