Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_1576 |
Symbol | |
ID | 5369658 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 1904278 |
End bp | 1906365 |
Gene Length | 2088 bp |
Protein Length | 695 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640829772 |
Product | outer membrane protein precursor MtrB |
Protein accession | YP_001365786 |
Protein GI | 153000105 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type [TIGR03509] decaheme-associated outer membrane protein, MtrB/PioB family |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0247408 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTTA AACTCAATTT GATCACTCTT GCGTTACTGG CAAACACAGG TTTTGCGATA GCGGCCGATG GGTATGGCTT GGCCAATGCC AATACCGAAA AAGTCAAAAT GTCCGCATGG AGCTGTAAAG GCTGCGTCGT TGAAACGGGC ACATCGGGTA CTGTGGGTGT CGGCGTAGGT TATAACAGTG AAGAGGATAT TCGCTCGGCG AATGCCTTTG GGACTTCAAA CGAAGTCGCT GGGAAATTGG ATGCTGATGT CACCTTTCGC GGTGAAAAAG GCTATCGCGC CAGCGTTGAA GCCTATCAAC TGGGTATGGA TGGCGGCCGC TTAGAGGTGA ATGCCGGCAA ACAAGGCCAG TACAATGTCA ATGTGAACTA TCGCCAGATT GCCACTTACA ACAGCAACAG TGCCTTAACG CCCTACTCGG GTGTGGGCAG CGATAATTTA ACGCTGCCAG ACAACTGGGT GACGGCGGGT TCAAGCAGCC AAATGCCATT ACTGATGGAC AGCCTGAACT CCTTAGAACT GTCGCTCAAA CGTGAGCGCA CTGGGCTAGG TTTTGATTAT CAAGGTGAAT CGCTTTGGAG CACACATGTG AGCTACATGC GTGAAGAAAA AACCGGCTTG AAAAAAGCAT CTGGTGGATT CTTCAACCAA TCTATGATGT TAGCCGAGCC TGTTGATTAC ACCACTGACT CCATTGAAGC GGGTATCAAG CTTAAAGGCG ACAACTGGTT CACTGCACTT AACTACAATG GCTCGATTTT TAAGAATGAG TACAATCAGT TAAATTTTGA CAGTGCGTTT AATCCAACCT TTGGCGCGCA AACCTCTGGC AGTATCGCCC TTGATCCAGA CAATCAGTCA CACACAGTAT CGTTAATGGG CCAATACAAC GACAGTACCA ATGTGCTATC GGCTCGCTTG CTTACCGGAC AAATGAGTCA AGACCAAGCG TTAGTGACTT CAGGTTATGG TTATCAAGTG CCAACTGAAG CCCTTGATGC CAAGGTCGAC CTTATCGGTT TGAACTTAAA AGTGGTCAGC AAAGTCACCA ACTCACTGCG CTTAAGTGGT AGCTACGACT ATAACGACCG CGATAACAAT ACGCAGATTG AAGAGTGGAC CCAAGTCAGC ATCAACAATG TCAACGGTAA GGTGGCCTAT AACACCCCTT ACGATAACAC TAGCCAGCGC TTCAAAGTGG CGGCGGATTA TCGTATTACC CGCGGCATGA AACTCGATGG CGGCTATGAC TTCAGACGTG ACGAACGTAA TTATCAAGAC CGTGAAACCA CGGATGAGAA TACCGTTTGG GCGCGTTTCA GAGTCAACAG CTTCGAGACT TGGGATATGT GGGTTAAGGG CAGTTACGGT CAACGTGACG GCTCTGAATA TCAAGCCTCT GAATGGACAT CGTCTGAAAC CAACAGCCTG TTGCGTAAGT ACAATCTGGC GAACCGTGAC AGAACCCAAG TGGAAGCGCG AGTCACTCAC TCGCCTATCG AAAGCCTGAC CATAGATTTC GGTGCCCGTT ACGCATTAGA TGACTATACA GATACTGTCA TCGGTTTAAC TGAGTCAAAA GACACCAGTT ATGATGCCAA CATCAGCTAC ATGATCACCG ATGACTTACT GGCGAACGCC TTCTACAACT ATCAAATCAT TGAATCTGAA CAGGCGGGAA GCAGTAACTA CAGCACCCCA ACCTGGACAG GTTTCATTGA AGATAAAGTC GATGTTGTCG GCGCTGGCAT TAGCTACAAC AACCTACTTG AGAACAAGTT ACGCATGGGA CTGGATTACA CCTATTCAGA CTCCAACAGT AACACCCAAG TTAGACAAGG TATCACAGGC GACTACGGCG ATTATTTTGC CAAAGTACAC AACATTAACT TATACGCTCA ATATCAAGCC ACCGAGAAAA TGGCGCTGCG CTTCGATTAT AAAATTGAGA ACTATAAGGA CAATGACGCT GCCAATGATA TCGCCGTCAA TGGGATCTGG AACGTCGTAG GTTTTGGTGA TAATAGCCAT GACTACACAG CGCAGATGAT CATGTTAAGC ATGAGCTACA AGATCTAA
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Protein sequence | MKFKLNLITL ALLANTGFAI AADGYGLANA NTEKVKMSAW SCKGCVVETG TSGTVGVGVG YNSEEDIRSA NAFGTSNEVA GKLDADVTFR GEKGYRASVE AYQLGMDGGR LEVNAGKQGQ YNVNVNYRQI ATYNSNSALT PYSGVGSDNL TLPDNWVTAG SSSQMPLLMD SLNSLELSLK RERTGLGFDY QGESLWSTHV SYMREEKTGL KKASGGFFNQ SMMLAEPVDY TTDSIEAGIK LKGDNWFTAL NYNGSIFKNE YNQLNFDSAF NPTFGAQTSG SIALDPDNQS HTVSLMGQYN DSTNVLSARL LTGQMSQDQA LVTSGYGYQV PTEALDAKVD LIGLNLKVVS KVTNSLRLSG SYDYNDRDNN TQIEEWTQVS INNVNGKVAY NTPYDNTSQR FKVAADYRIT RGMKLDGGYD FRRDERNYQD RETTDENTVW ARFRVNSFET WDMWVKGSYG QRDGSEYQAS EWTSSETNSL LRKYNLANRD RTQVEARVTH SPIESLTIDF GARYALDDYT DTVIGLTESK DTSYDANISY MITDDLLANA FYNYQIIESE QAGSSNYSTP TWTGFIEDKV DVVGAGISYN NLLENKLRMG LDYTYSDSNS NTQVRQGITG DYGDYFAKVH NINLYAQYQA TEKMALRFDY KIENYKDNDA ANDIAVNGIW NVVGFGDNSH DYTAQMIMLS MSYKI
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