Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_1571 |
Symbol | |
ID | 5371825 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 1898507 |
End bp | 1899865 |
Gene Length | 1359 bp |
Protein Length | 452 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640829767 |
Product | gluconate transporter |
Protein accession | YP_001365781 |
Protein GI | 153000100 |
COG category | [E] Amino acid transport and metabolism [G] Carbohydrate transport and metabolism |
COG ID | [COG2610] H+/gluconate symporter and related permeases |
TIGRFAM ID | [TIGR00791] gluconate transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.486424 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACTTAG TGCTTATTCT TATCGGCGTG ATTGCATTTA TTGTTATCGC GACCTCAAAA TTTAAACTCC ACCCCTTTTT AACCTTAATT CTAGCCGCCT TTATCGCGGC GTTCGCCTAT GGTTTACCGA GCGGAGAAAT CGCTAAAACC ATCACCACAG GTTTTGGCGG CATCTTAGGT TATATCGGCC TTGTGATCGT CTTGGGGACT ATCATAGGTA TCATTCTAGA AAAAAGCGGC GCCGCCATTA CTATGGCTGA TGTGGTCATC AAGGTATTAG GTAAACGCTT CCCGACATTA ACTATGTCGG TCATCGGCTA CCTAGTGTCT ATTCCAGTTT TTTGTGACTC AGGCTTTGTG ATCTTGAACT CGCTAAAACA ATCGATGGCG AACCGCATGA AGGTCTCTAG CGTCTCCATG AGCGTTGCCT TAGCCACGGG TCTGTATGCC ACTCACACCT TTGTACCGCC AACACCGGGG CCTATCGCCG CCGCGGGTAA CTTAGGCTTA GAGTCGAACT TGGGCTTAGT GATTGGCGTG GGTCTCTTTG TGGCCGCCGT AGCCGCATTA GCAGGCATGT TATGGGCGAA CCGTTTTGCC GATGTTGAGC CAGATGGTGA AGGTGCGCAG GAGCTTAAAG CGGAAGCGAG CGACTATGAA ACCCTGAAAA AAAGCTATGG CACCCTGCCC AGCCCATTAA AAGCCTTCGC ACCGATTTTT GTGCCTATCG TATTAATTTG TTTAGGTTCT ATCGCTAACT TCCCTTCAGC GCCTTTAGGT AAAGCAGGGT TATTTGACGC GCTAGTGTTC CTCGGTCAGC CCGTTAACGC TCTGATGATT GGCCTATTCT TATCCCTGTC GTTATTAAAG GGTGAGAATA AGATCAGTGA ATTTAGCGAG CGCATCAGCC AAGGGTTAGT CACAGCCGCG CCGATTATTT TAATCACAGG TGCGGGCGGT GCCTTTGGTG CTGTCTTAAA AGCCACGCCT ATCGGTGACT TTTTAGGCAC ATCATTGTCG GCACTCGGTA TCGGTATCTT TATGCCGTTC ATCGTCGCCG CGGCGCTTAA ATCGGCGCAG GGTTCATCGA CAGTGGCGTT GGTCGCAACC TCAGCACTGG TTGCGCCTAT GCTCGGTGAT ATCGGCCTTG GCAGCGATAT GGGCCGCGTA TTAACGGTAA TGGCGATTGG TGCCGGTGCG ATGACGGTTT CCCACGCTAA TGACAGCTTC TTCTGGGTCG TCACCCAATT TAGCCGCATG AGTGTGAAAC AAGCTTACAA AGCACAAACC ATGGCAACCC TTATTCAAGG TGTCACCGCT ATGTTGACAG TGTATGTGCT GAGCTTAGTC TTGCTCTGA
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Protein sequence | MNLVLILIGV IAFIVIATSK FKLHPFLTLI LAAFIAAFAY GLPSGEIAKT ITTGFGGILG YIGLVIVLGT IIGIILEKSG AAITMADVVI KVLGKRFPTL TMSVIGYLVS IPVFCDSGFV ILNSLKQSMA NRMKVSSVSM SVALATGLYA THTFVPPTPG PIAAAGNLGL ESNLGLVIGV GLFVAAVAAL AGMLWANRFA DVEPDGEGAQ ELKAEASDYE TLKKSYGTLP SPLKAFAPIF VPIVLICLGS IANFPSAPLG KAGLFDALVF LGQPVNALMI GLFLSLSLLK GENKISEFSE RISQGLVTAA PIILITGAGG AFGAVLKATP IGDFLGTSLS ALGIGIFMPF IVAAALKSAQ GSSTVALVAT SALVAPMLGD IGLGSDMGRV LTVMAIGAGA MTVSHANDSF FWVVTQFSRM SVKQAYKAQT MATLIQGVTA MLTVYVLSLV LL
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