Gene Shew185_1571 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1571 
Symbol 
ID5371825 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp1898507 
End bp1899865 
Gene Length1359 bp 
Protein Length452 aa 
Translation table11 
GC content50% 
IMG OID640829767 
Productgluconate transporter 
Protein accessionYP_001365781 
Protein GI153000100 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism 
COG ID[COG2610] H+/gluconate symporter and related permeases 
TIGRFAM ID[TIGR00791] gluconate transporter 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.486424 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTTAG TGCTTATTCT TATCGGCGTG ATTGCATTTA TTGTTATCGC GACCTCAAAA 
TTTAAACTCC ACCCCTTTTT AACCTTAATT CTAGCCGCCT TTATCGCGGC GTTCGCCTAT
GGTTTACCGA GCGGAGAAAT CGCTAAAACC ATCACCACAG GTTTTGGCGG CATCTTAGGT
TATATCGGCC TTGTGATCGT CTTGGGGACT ATCATAGGTA TCATTCTAGA AAAAAGCGGC
GCCGCCATTA CTATGGCTGA TGTGGTCATC AAGGTATTAG GTAAACGCTT CCCGACATTA
ACTATGTCGG TCATCGGCTA CCTAGTGTCT ATTCCAGTTT TTTGTGACTC AGGCTTTGTG
ATCTTGAACT CGCTAAAACA ATCGATGGCG AACCGCATGA AGGTCTCTAG CGTCTCCATG
AGCGTTGCCT TAGCCACGGG TCTGTATGCC ACTCACACCT TTGTACCGCC AACACCGGGG
CCTATCGCCG CCGCGGGTAA CTTAGGCTTA GAGTCGAACT TGGGCTTAGT GATTGGCGTG
GGTCTCTTTG TGGCCGCCGT AGCCGCATTA GCAGGCATGT TATGGGCGAA CCGTTTTGCC
GATGTTGAGC CAGATGGTGA AGGTGCGCAG GAGCTTAAAG CGGAAGCGAG CGACTATGAA
ACCCTGAAAA AAAGCTATGG CACCCTGCCC AGCCCATTAA AAGCCTTCGC ACCGATTTTT
GTGCCTATCG TATTAATTTG TTTAGGTTCT ATCGCTAACT TCCCTTCAGC GCCTTTAGGT
AAAGCAGGGT TATTTGACGC GCTAGTGTTC CTCGGTCAGC CCGTTAACGC TCTGATGATT
GGCCTATTCT TATCCCTGTC GTTATTAAAG GGTGAGAATA AGATCAGTGA ATTTAGCGAG
CGCATCAGCC AAGGGTTAGT CACAGCCGCG CCGATTATTT TAATCACAGG TGCGGGCGGT
GCCTTTGGTG CTGTCTTAAA AGCCACGCCT ATCGGTGACT TTTTAGGCAC ATCATTGTCG
GCACTCGGTA TCGGTATCTT TATGCCGTTC ATCGTCGCCG CGGCGCTTAA ATCGGCGCAG
GGTTCATCGA CAGTGGCGTT GGTCGCAACC TCAGCACTGG TTGCGCCTAT GCTCGGTGAT
ATCGGCCTTG GCAGCGATAT GGGCCGCGTA TTAACGGTAA TGGCGATTGG TGCCGGTGCG
ATGACGGTTT CCCACGCTAA TGACAGCTTC TTCTGGGTCG TCACCCAATT TAGCCGCATG
AGTGTGAAAC AAGCTTACAA AGCACAAACC ATGGCAACCC TTATTCAAGG TGTCACCGCT
ATGTTGACAG TGTATGTGCT GAGCTTAGTC TTGCTCTGA
 
Protein sequence
MNLVLILIGV IAFIVIATSK FKLHPFLTLI LAAFIAAFAY GLPSGEIAKT ITTGFGGILG 
YIGLVIVLGT IIGIILEKSG AAITMADVVI KVLGKRFPTL TMSVIGYLVS IPVFCDSGFV
ILNSLKQSMA NRMKVSSVSM SVALATGLYA THTFVPPTPG PIAAAGNLGL ESNLGLVIGV
GLFVAAVAAL AGMLWANRFA DVEPDGEGAQ ELKAEASDYE TLKKSYGTLP SPLKAFAPIF
VPIVLICLGS IANFPSAPLG KAGLFDALVF LGQPVNALMI GLFLSLSLLK GENKISEFSE
RISQGLVTAA PIILITGAGG AFGAVLKATP IGDFLGTSLS ALGIGIFMPF IVAAALKSAQ
GSSTVALVAT SALVAPMLGD IGLGSDMGRV LTVMAIGAGA MTVSHANDSF FWVVTQFSRM
SVKQAYKAQT MATLIQGVTA MLTVYVLSLV LL