Gene Shew185_1563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1563 
Symbol 
ID5371214 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand- 
Start bp1889169 
End bp1889825 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content47% 
IMG OID640829759 
Producthexapaptide repeat-containing transferase 
Protein accessionYP_001365773 
Protein GI153000092 
COG category[R] General function prediction only 
COG ID[COG0110] Acetyltransferase (isoleucine patch superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.856623 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGACA CAACAACCCA TTCCCAATTA GGCCCAAACC CCAACGATAA AGCGCCGATG 
AAAGGCTTTC CTCAGGTTGG CTTTCTTAAA AACTTTATTA CCCGCGAAAA CATTATTGTC 
GGTGATTACA CTTATTATGA CGATCCAGCT GGTCCTGAAA GATTCGAGTC GAATGTGCTT 
TATCACTTTG ACTTTATTGG CGATAAACTA AATATCGGTA AATTCTGCGC CATTGCGAAA 
GACGTGAAAT TCATTATGAA TGGCGCCAAT CATCAAGTGT CTGGCTTTTC AACTTATCCC 
TTTTATATCT TCGGCAATGG CTGGGAGAAA GCGGCGCCCA AGCCCGAAGA TTTACCTTTT 
AAGGGCGACA CCTGTATCGG TAACGATGTG TGGATTGGCT ATAACGCCAC TATCATGCCT 
GGAGTGAAGA TTGGCCACGG CGCAATTGTT GCCAGTCAAT CCGTGGTGAC AAAAGATGTG 
CCGCCCTACG CTGTAGTTGG CGGTAATCCT GCCACTGTCA TCAAGCTCAG GTTCGAGCAA 
GATGTGATAG ATAAGCTCGT TACCATCGCT TGGTGGGATT GGCCGATAGA AAAAATCACT 
CAGCACCTAC ACGCCATCGC GGGCGCGGAT CTGACTCAAT TACAGCAGGC GACCTAA
 
Protein sequence
MPDTTTHSQL GPNPNDKAPM KGFPQVGFLK NFITRENIIV GDYTYYDDPA GPERFESNVL 
YHFDFIGDKL NIGKFCAIAK DVKFIMNGAN HQVSGFSTYP FYIFGNGWEK AAPKPEDLPF 
KGDTCIGNDV WIGYNATIMP GVKIGHGAIV ASQSVVTKDV PPYAVVGGNP ATVIKLRFEQ 
DVIDKLVTIA WWDWPIEKIT QHLHAIAGAD LTQLQQAT