Gene Shew185_1560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1560 
Symbol 
ID5371067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp1886813 
End bp1887115 
Gene Length303 bp 
Protein Length100 aa 
Translation table11 
GC content46% 
IMG OID640829756 
Productbranched-chain amino acid transport 
Protein accessionYP_001365770 
Protein GI153000089 
COG category[S] Function unknown 
COG ID[COG4392] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTTGGT TAATGATTTT CTCAATGGCA GCGGTTGTGT TTATTAGTCG TCATTTACTG 
CTCGAACCTA AATTACCGCT GCGATTAAGT AAGGGCACCC AAACTTTTTT AAGTTACTCA
GCCCCTGCAG TACTGACCGC TATCTTCGCG CCCATAGTGT TTGTGCAAGA AGGCCAGCTC
GATCTCAGCT TAGACAACAG CTATCTCATC TGCGCCGTGG TCGCGACGAT ACTCGCGCTC
GTCACCCGTA ACACCTTGTT GACCACAGTG TTGAGTATGG GACTGTTTTT CTTTATCCAT
TAA
 
Protein sequence
MIWLMIFSMA AVVFISRHLL LEPKLPLRLS KGTQTFLSYS APAVLTAIFA PIVFVQEGQL 
DLSLDNSYLI CAVVATILAL VTRNTLLTTV LSMGLFFFIH