Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_1560 |
Symbol | |
ID | 5371067 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 1886813 |
End bp | 1887115 |
Gene Length | 303 bp |
Protein Length | 100 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640829756 |
Product | branched-chain amino acid transport |
Protein accession | YP_001365770 |
Protein GI | 153000089 |
COG category | [S] Function unknown |
COG ID | [COG4392] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTTGGT TAATGATTTT CTCAATGGCA GCGGTTGTGT TTATTAGTCG TCATTTACTG CTCGAACCTA AATTACCGCT GCGATTAAGT AAGGGCACCC AAACTTTTTT AAGTTACTCA GCCCCTGCAG TACTGACCGC TATCTTCGCG CCCATAGTGT TTGTGCAAGA AGGCCAGCTC GATCTCAGCT TAGACAACAG CTATCTCATC TGCGCCGTGG TCGCGACGAT ACTCGCGCTC GTCACCCGTA ACACCTTGTT GACCACAGTG TTGAGTATGG GACTGTTTTT CTTTATCCAT TAA
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Protein sequence | MIWLMIFSMA AVVFISRHLL LEPKLPLRLS KGTQTFLSYS APAVLTAIFA PIVFVQEGQL DLSLDNSYLI CAVVATILAL VTRNTLLTTV LSMGLFFFIH
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