Gene Shew185_1555 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1555 
Symbol 
ID5370486 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp1880977 
End bp1882698 
Gene Length1722 bp 
Protein Length573 aa 
Translation table11 
GC content52% 
IMG OID640829751 
Productphosphoglucomutase/phosphomannomutase alpha/beta/subunit 
Protein accessionYP_001365765 
Protein GI153000084 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1109] Phosphomannomutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATACCC ATCTGCAGTT ACAGGTAAAC CATTGGCTTG AAAATGATCC TGACCCTCGC 
ACTCAAACCC AATTACAAAC CCTAATTGAT AACGGCAATG AAGCCGAACT CGCAGCGCGC
TTTGCGGGTC GTTTAGAGTT TGGTACCGCA GGATTACGCG GTGTGGTCGG CGCTGGGCCT
ATGGGGATGA ACCGTCTGGT GATCCGTCAA ACCTCGGCAG GCCTTGGTGC TTATCTACTT
GATCAGATTA AAGATGCCGC CGAGCGTGGT GTGGTGATTG GTTATGATGG TCGCCACGAC
TCATTCAATT TTGCCCATGA TGCGGCGAGC GTACTGACCG CTATGGGCAT TAAGGTGCGC
TTAACGTCTA AAGTGGCGCC GACACCGCTG GTGGCCTTTG GGGTTAAACA TTTTAATGCG
GCAGCAGGCA TTGTAGTGAC CGCGAGTCAT AACCCGCCGC AATACAATGG CTATAAAGTG
TATTGGGAGA ATGGCGCGCA GATTATTCCG CCCCACGATT CTGGCATTGC CGCGCAAATT
GAGCGCGCCG CGAATCAAGC GATTCCGTTT TTAGAACATG ATGAGGCGGT AAAACAAGGT
AAGTTGACAC TCCTGCAGGA TGATTTTTAC CAAAGTTATC GCCATGGCGT GCAGCAAGCT
GAGGTGCTGC AAAACCATAC GGCTCCAGAA AAGGTCAGTT TAGCCTATAC CGCCATGCAC
GGCGTGGGCG CTGAAATGGC TGAAACCGTA TTGAAAGATG CGGGTTTCAC CCAAGTGTAT
TCGGTAGCCT CCCAGCGCGA ACCCGATGGG GATTTCCCGA CGGTGAACTT CCCCAATCCG
GAAGAAAAGG GCGCGATGGA TTTAGTGATC GCCGAGGCGA AAAAACACGG CGCTATGCTC
GCCTGTGCTA ACGATCCCGA TGCCGACCGT TTTGCGGTCG CTGTGCGCCG TGAGGATGGC
GAATACCAGA TGCTAACGGG CGATCAAGTT GGTGTGCTCT TTGGGCATTA CTTGTTATCT
CATGCTAAAG ATAATCAGCG ACTTACGGGT ACCACGATAG TGTCATCGAG TCTGTTATCT
AAGATTGCGC AAGGGTTTGG CACGCAAAGC TTTACCACGC TCACCGGCTT TAAGTGGCTG
ATGAATGTGG GTATCGCGAA AACGTCCCCT GAGGATCAGT TCCTGTTTGC CTATGAAGAA
GCCCTTGGTT ACACAGTTGG CAGCATGGTG TGGGATAAAG ATGGCTTGTC GGCGCTGGTG
GCATTTGCCC AATTAACTGC CGAGCTGGTG GCGAAGGGGC AAACGATTTG GGACAGACTC
GAGCAAATTT ACCGTGAGCA TGGCTTCCAT CTCAATGCGC AGGTGAGTAT TGCACTAAAA
CCTGACACGC CTAATATTGG CGCCTATTTA CGCGAACATC CCCCCGTGAA GATTGGTGAG
CAAGACGTGC TCTCAACCGA TGATTTAAAA GCCCTTGAGC GTCGTTTTGC CGATGGTCGG
GTTGAGAAAA TCGACTTGCC ACCGAGTGAT GTATTGACCT ATTGCTTAGC GGGTGGCGCT
CGGGTGATCG TCAGGCCATC TGGTACTGAA CCTAAAATTA AGTGCTACTA CGAAGTGGTC
GAAACTATGG TTGATACGGA TACCTTAGCC AGCGCCCAAG CGAGGGCGAG CAAAGCCATG
GATGATTTTA TTCAGTCGCA CCAAGCCAGT TTGCCAAAGT AA
 
Protein sequence
MNTHLQLQVN HWLENDPDPR TQTQLQTLID NGNEAELAAR FAGRLEFGTA GLRGVVGAGP 
MGMNRLVIRQ TSAGLGAYLL DQIKDAAERG VVIGYDGRHD SFNFAHDAAS VLTAMGIKVR
LTSKVAPTPL VAFGVKHFNA AAGIVVTASH NPPQYNGYKV YWENGAQIIP PHDSGIAAQI
ERAANQAIPF LEHDEAVKQG KLTLLQDDFY QSYRHGVQQA EVLQNHTAPE KVSLAYTAMH
GVGAEMAETV LKDAGFTQVY SVASQREPDG DFPTVNFPNP EEKGAMDLVI AEAKKHGAML
ACANDPDADR FAVAVRREDG EYQMLTGDQV GVLFGHYLLS HAKDNQRLTG TTIVSSSLLS
KIAQGFGTQS FTTLTGFKWL MNVGIAKTSP EDQFLFAYEE ALGYTVGSMV WDKDGLSALV
AFAQLTAELV AKGQTIWDRL EQIYREHGFH LNAQVSIALK PDTPNIGAYL REHPPVKIGE
QDVLSTDDLK ALERRFADGR VEKIDLPPSD VLTYCLAGGA RVIVRPSGTE PKIKCYYEVV
ETMVDTDTLA SAQARASKAM DDFIQSHQAS LPK