Gene Shew185_1546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1546 
Symbol 
ID5371641 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp1868928 
End bp1869977 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content51% 
IMG OID640829742 
Product3-oxoacyl-(acyl carrier protein) synthase III 
Protein accessionYP_001365756 
Protein GI153000075 
COG category[I] Lipid transport and metabolism 
COG ID[COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.516621 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATATT CCCGCGTATT TATTAATAGC CTGGCCTATG AACTGGCGCC TGTTGTGGTT 
TCCAGTAGTG AGCTAGAGTC TCGTCTTGCT CCTTTGTATC AAAAGTTCCG TATTCCAATG
GGACAGCTTG CCGCATTGAC TGGGATTACT GAACGCCGCT GGTGGCCAAA AGGACATCAA
TTGTCCGACG GTGCGATTAA AGCTGCCCGT AAAGCCATGG TTGAAACTGG GATTGATGTC
GCCGATTTAG GTGCTGTTGT CTATACCGGC GTTTGCCGCG ATCAACATGA GCCCGCGACT
GCGTGTCGTG TTGCTGCCGA ATTGGGCGTG TCAAAAGACA CCGCCATTTA CGATATCAGC
AACGCTTGTC TTGGGGTGTT ATCGGGTATT TTAGATATCG CTAACCGTAT TGAGTTGGGG
CAAATCAAGG CGGGTATGGT GGTGTCCTGT GAATCGGCGC GGGATATTGT CGATGTCACT
ATCGATAACA TGCTGGCCGA TCCCACTATG CAGAATTTTG CCCAGTCGCT GGCGACCTTA
ACCGGTGGCT CTGGCGCAGT GGCGGTTATC CTTACCGACG GCAGTTTGCC GCTGACAAAT
GTGCGCCAGC ATCAATTGCT GGGTGCATCG CACTTATCGG CGCCTGAGCA CCACCAGTTG
TGTCAATGGG GTCTGCAGGA AGTGGGGCAC AATCTGTATC GCGAGTTTAT GCGTACCGAT
GCGGTGACGC TTCTCAAAGA AGGCGTTGAG CTGGCTAAGC ATACTTGGGA ACATTTCCTT
GAGCAGCGTA ATTGGCTGGT TGAGCAAGTG GACAAAGTGA TTTGCCATCA AGTGGGCGCC
TCAAACCGTA AGCAAGTGCT TAGCGCGTTA AATATTCCCC CCGAGAAAGA ATTTCCAACG
TATCAGCTGC TGGGCAATAT GGGCACAGTG TCGTTACCTG TGACCGCCGC CATGGCGCAC
GATCAAGGCT TTTTACAAGC GGGCGATCAA GTGAGCTTTT TAGGCATAGG CAGTGGATTG
AATTGCATGA TGTTAGGCAT TAAGTGGTAG
 
Protein sequence
MKYSRVFINS LAYELAPVVV SSSELESRLA PLYQKFRIPM GQLAALTGIT ERRWWPKGHQ 
LSDGAIKAAR KAMVETGIDV ADLGAVVYTG VCRDQHEPAT ACRVAAELGV SKDTAIYDIS
NACLGVLSGI LDIANRIELG QIKAGMVVSC ESARDIVDVT IDNMLADPTM QNFAQSLATL
TGGSGAVAVI LTDGSLPLTN VRQHQLLGAS HLSAPEHHQL CQWGLQEVGH NLYREFMRTD
AVTLLKEGVE LAKHTWEHFL EQRNWLVEQV DKVICHQVGA SNRKQVLSAL NIPPEKEFPT
YQLLGNMGTV SLPVTAAMAH DQGFLQAGDQ VSFLGIGSGL NCMMLGIKW