| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1529 |
|---|
| Symbol | |
|---|
| ID | 5371774 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | - |
|---|
| Start bp | 1849168 |
|---|
| End bp | 1849989 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640829726 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001365740 |
|---|
| Protein GI | 153000059 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00000187706 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAGGAA CGCTAAAAAA GATGCGCGTA CAGTTAGATG ACGCGCAACA AGTGCAATAT
CAACTCGTTG TCGGTGATGA GTTACTCCCG CTCAATCCAT TGATAGGCAA GCAATTAACC
TTGACTCACA CGGGCAATAT CTTCTGCTGC AACTGCGGTA AAAAGAGTAA GAAGAGTTAC
TCGCAGGGCC ACTGTTTTGT CTGTATGCAA AAGCTGGCGA GTTGCGATAT GTGCATCATG
AAGCCGGAAA CTTGCCATTA CGACCAAGGC ACTTGCCGCG AACCCGAGTG GGCCCAGAGC
CACTGTTTTG TGCCGCATTA TGTGTATTTG GCGAATACTT CGGGCGTTAA AGTCGGCATT
ACCCGCCACA CTCAACTGCC TACCCGTTGG ATTGACCAAG GTGCCACCCA AGGTTTGCCG
ATTTTTAAAG TATCAACAAG GCAACTCTCA GGTCTGGTCG AAGTTGAATT GGCGAAACTG
GTGAACGATA AAACCCATTG GCAAGCCATG TTAAAGGGCC ACGCCGACGA TATCGATTTA
AATGCGAAAG CCGCAGAACT GATCCCGCAA ATTGAGGCTA AGCTGCACGA AATCGGCATG
CAAAAAGGCG ATTACAGTAT CGAGCGTTTA GATGAAACGA TTCAGCCGAT TCATTATCCC
ATCGACACCT TTCCGAAGAA GATCACTTCT CACAACTTCG ATAAAAATGG GGTGGTGAGC
GGGATTTTGC AGGGGATTAA AGGTCAGTAT TTAATGTTCG ATACCGGCGT GATTAATATT
CGTAAGTTTT CATCCTACGA GATCAGCGTC GAACACGACT GA
|
|---|
| Protein sequence | MLGTLKKMRV QLDDAQQVQY QLVVGDELLP LNPLIGKQLT LTHTGNIFCC NCGKKSKKSY
SQGHCFVCMQ KLASCDMCIM KPETCHYDQG TCREPEWAQS HCFVPHYVYL ANTSGVKVGI
TRHTQLPTRW IDQGATQGLP IFKVSTRQLS GLVEVELAKL VNDKTHWQAM LKGHADDIDL
NAKAAELIPQ IEAKLHEIGM QKGDYSIERL DETIQPIHYP IDTFPKKITS HNFDKNGVVS
GILQGIKGQY LMFDTGVINI RKFSSYEISV EHD
|
|---|
| |