Gene Shew185_1528 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1528 
Symbol 
ID5371773 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp1848200 
End bp1848919 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content49% 
IMG OID640829725 
Producthypothetical protein 
Protein accessionYP_001365739 
Protein GI153000058 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000247556 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCAATC CGCTGCATAA CGCGTTACAT CGAGAGCGAA GTGGAGAGCT TAATCGGGGC 
CTAAGTCGAA GGCAGGATCT AAGCCTAAGT CGAGGACTAA ATCTAGATAT TAGCCGAGTG
CTCAATAGAT ATTTAGCTGT GTTAGTGCTG CTGTTCACAG GCGCTTTAGG TCTTACAGGG
TGCGTGACTG TGACGGATAA CGCGGCGCAG CCGCTGCGAA CCACAGTCGT GATGTCTGGC
GATCTCAGTG AATTACCACC AACCGCCATG ACGTACACTT GGCATCCCAA GTTTCAAAAA
ATTATCACAG ACAAGCGCTT AGAGCCGCAG CAAGTGTTGC AGCACATGCA AGATGTACTC
GAACAGAGTT TGCAGAATAA GGGATATCGC TGGGTTGAAG ATCCACAACT GGCGGATTTT
CAGGTCGGGT TTGGTGTCGC CATGGGCACT GAAATGAGCG ATGAGCAAAT TCTGGCGGTA
ACAGGCTTGG TTGCTGGGCT TTCGACCGAC GGTGTGAACA CTAAAAAGTA TGACAAGGGC
ACTGTGGTGA TAGCACTGTT TAAGCCGACT AAAATAAAGG GCGGCGGTGA CGAACCCATT
TGGCGTGTCC TTGCCCAAGG CTTTGGCAAC ATTAAAAAGA TGGATGAGCT AACCGAAAAC
TTCGACAGTC TTATTGCCAG CATGGTGGCC AATATACCAT CGGTTAATGT GGCACCTTAG
 
Protein sequence
MINPLHNALH RERSGELNRG LSRRQDLSLS RGLNLDISRV LNRYLAVLVL LFTGALGLTG 
CVTVTDNAAQ PLRTTVVMSG DLSELPPTAM TYTWHPKFQK IITDKRLEPQ QVLQHMQDVL
EQSLQNKGYR WVEDPQLADF QVGFGVAMGT EMSDEQILAV TGLVAGLSTD GVNTKKYDKG
TVVIALFKPT KIKGGGDEPI WRVLAQGFGN IKKMDELTEN FDSLIASMVA NIPSVNVAP