| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1527 |
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| Symbol | |
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| ID | 5369545 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 1847208 |
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| End bp | 1847801 |
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| Gene Length | 594 bp |
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| Protein Length | 197 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640829724 |
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| Product | lysine exporter protein LysE/YggA |
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| Protein accession | YP_001365738 |
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| Protein GI | 153000057 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1280] Putative threonine efflux protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0050843 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAGTTAA TACTCGCTAT CGCGCTATTC GCCTTCTCAT CGGGGATAAC CCCAGGGCCG
AACAACATTA TGCTGATGAC TTCAGGGGTT AACTTCGGCG TAAAACGCAG TATTCCGCAT
CTGCTGGGAA TAAGCCTTGG CTTCCCAACC ATGATCCTCG CGATCGGCTT GGGCTTAAGC
GCGCTCTTCC AAAGCTATCC TATCATCCAT CAAGTGATTA AAGTCGTCGG CATAGGTTAC
CTTTTGTATC TGTCTTGGCT TATCGCCAAC AGCAGTAGCA AGATGGAAGG CAAAGCCATT
GCCAAACCCT TCAGTTTTAT CCAAGCTGCG GCGTTTCAAT GGGTGAATCC TAAGGGCTGG
ATCATGGCAG TGGGCGCGAT TGCAACGTTC ACATCAGTAC AGCAAGATTT AACCCCGCAG
GTCATCACTA TCGCGACAGT ATTTTTATGT GTCGCTTTCC CCTGTGCCAT TGTGTGGCTA
GGTTTTGGCG TGGCCCTTAA GCGAATTTTA AAAAATGAGC GCCAGCAGAA GATCTTCAAT
ATCACTATGG CAGTCTTGCT TGTGGCGTCT ATCATCCCTA TGATCGCCCC CTAA
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| Protein sequence | MELILAIALF AFSSGITPGP NNIMLMTSGV NFGVKRSIPH LLGISLGFPT MILAIGLGLS
ALFQSYPIIH QVIKVVGIGY LLYLSWLIAN SSSKMEGKAI AKPFSFIQAA AFQWVNPKGW
IMAVGAIATF TSVQQDLTPQ VITIATVFLC VAFPCAIVWL GFGVALKRIL KNERQQKIFN
ITMAVLLVAS IIPMIAP
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