Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_1524 |
Symbol | |
ID | 5373589 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 1843368 |
End bp | 1844681 |
Gene Length | 1314 bp |
Protein Length | 437 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640829721 |
Product | putative periplasmic protein |
Protein accession | YP_001365735 |
Protein GI | 153000054 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.195212 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACTGA CAAATATTGC TTTGGCATTT GCCACAATTT TTATAACATT ACATCCATTT ACCTCACATG CTTCGGAAGA AACTGCAGTA AATGTAGAAG CTTATGATAA AGACGTCGAA CCATTTAAAT CTGTTGGCTC AGTTCTAGAT GAGCAGATTT CAGCGTACTT TCGCTCGATA AAAGCATCAC CAGGTTTACC ATCCGCAACT GGTAAAACTT ATTATTCGGC AACTCAGACT GTCTCTGTTA GTCCTGAAAG CCCAGACTTC CCTAAAGCGT TGCAGATTGC GTTCGACAAA GCATTTAATA ATGCTCGTGC AGAATTTATT TTTGACAGAT TTGGAAGAGA AACTAGTAAG ACATATGCGG AGCTATACGA AAATGGAAAT AGTGACCGGG ACACGTTTAA TCCTGAGATG TGCGAGAAGT CTAAACTAGA GTCGATTTAT GACAAAATTA TCGCATTAGC CGAGAGTGAA TTAGATAAAG CGCTTGAGGA TAATGGTGTA GACCCCGTAG CATTTAAATC AACGCCAGAG ACTGCACGTA AGGATTTGTT CATCGATAAA AGTATTGAGA CAATTAGTCG CAGAGCAAAT GGCGAGATTG TCGGTATACT ACCCGTTAAA TCGTTCTATG CCATTGATAC GAAAGGGACT CCCAAAGTTG GTGTTGTCAT GGTTCATGCA CCGGAGCTTG TTGATGTCGC AAACGATATA CGTTTGGGAA AAACACCGTC ATTACGAGGT AAGAAACCTG GAAAACCTGT CAGCACCTAC GTCAACCTTC CGGAGTCAGA GCTAATAGCA AATTTCGGGC CTCGCTTAGT GTTTGATGAG CAAAATAGGC CCGTAATTCT CGCATACGCC CAATGGAACA GCGCCTATCA AGGTAATGAT TCACGACAAA GCGAGCGTTC AAGAGATGCA GCGTTCAAAA AAGCCGATAT GCAAGCTTCG CAACTAATCA CTGAATTTCT AAGTGGTAAA TTATCTCAGC AATCAGAGCT AATCGCAGGT GAATATATCC ACCGATATAT TGAAACTGAC TGCAAGAACC AAACCGAACA AGAAAAATCT ACATTAATTG ACGAATACGC AAGTAAACTC AAAATTACAG CTAGCGCAAA AGTTTCCGGC TCGACCGTAA TCAAGAAATG GTCGCTTATG AATAAGTATG GTGGGGAAAC TATTGGTGTC ATTAGAGCTT GGACGCCTGA ACTATCCGAT CTTATTCAGG AAAGCTCAAC TAAACAACAT AAAAGCAAAG TCAATTCTAG CTCTGGGGAT CTTGATCCTG AAGAGTCCTG GTAA
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Protein sequence | MKLTNIALAF ATIFITLHPF TSHASEETAV NVEAYDKDVE PFKSVGSVLD EQISAYFRSI KASPGLPSAT GKTYYSATQT VSVSPESPDF PKALQIAFDK AFNNARAEFI FDRFGRETSK TYAELYENGN SDRDTFNPEM CEKSKLESIY DKIIALAESE LDKALEDNGV DPVAFKSTPE TARKDLFIDK SIETISRRAN GEIVGILPVK SFYAIDTKGT PKVGVVMVHA PELVDVANDI RLGKTPSLRG KKPGKPVSTY VNLPESELIA NFGPRLVFDE QNRPVILAYA QWNSAYQGND SRQSERSRDA AFKKADMQAS QLITEFLSGK LSQQSELIAG EYIHRYIETD CKNQTEQEKS TLIDEYASKL KITASAKVSG STVIKKWSLM NKYGGETIGV IRAWTPELSD LIQESSTKQH KSKVNSSSGD LDPEESW
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