Gene Shew185_1512 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1512 
Symbol 
ID5372844 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand+ 
Start bp1828879 
End bp1829580 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content51% 
IMG OID640829709 
ProductTetR family transcriptional regulator 
Protein accessionYP_001365723 
Protein GI153000042 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGCTTA TTCCCGGTCG TCCTAGGGGC GTTGTTCCAT TTACTGCCCA ACCTGAATCA 
CCGCCCATTC TCGGTCGTCC GAAGGGAAAC TCAGACGCGC GTCAACGCTT AATAACCGCT 
GCCTTAAGTC TCTTTAGTCA CCGCAGTTAT CCTACTGTGT CTACCCGTGA AATCGCCCGC 
GAAGCCGAGG TCGATGCCGC GCTTATCCGT TACTATTTTG GTTCGAAAGC GGGTTTGTTC 
GAACAAATGG TGCGGGAAAC CCTTGAGCCC GTATTAACCC GCTTACGCGA AATATCCGCG 
GCTGAAGCGC CGAATAATGT CGGCGAAATC ATGCAGACCT ACTATCGCGT TATGGCACCC 
AACCCTGGCT TGCCACGACT GATTATACGG GTATTGCAGG AGGGCGATGG CTCGGAACCC 
TATCGGATTA TCTTGTCTGT ATTTGAGCAA GTGTTAACCC TGTCGCGGCA ATGGCTCGAA 
TCCACGTTAG TTAATTCGGG ATTATTAAAA GAGGGCGTCG ACCCCGATTT AGCACGGCTA 
AGTTTTGTGA GTCTTATGGT ATTTCCGCTT ATTGCCCCGC CCGTATTAAT GCGTCAGTTC 
GGCTTTTTTG ATGCCGATGC TGCGCTTTTG CAGCGCTTAG CTCTGCACAA TATGCAGGTT 
TTTACGCAGG GACTGTTATG TGAACCAAGG AGCCAGTCAT GA
 
Protein sequence
MSLIPGRPRG VVPFTAQPES PPILGRPKGN SDARQRLITA ALSLFSHRSY PTVSTREIAR 
EAEVDAALIR YYFGSKAGLF EQMVRETLEP VLTRLREISA AEAPNNVGEI MQTYYRVMAP 
NPGLPRLIIR VLQEGDGSEP YRIILSVFEQ VLTLSRQWLE STLVNSGLLK EGVDPDLARL 
SFVSLMVFPL IAPPVLMRQF GFFDADAALL QRLALHNMQV FTQGLLCEPR SQS