| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1509 |
|---|
| Symbol | |
|---|
| ID | 5372713 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | - |
|---|
| Start bp | 1825336 |
|---|
| End bp | 1826664 |
|---|
| Gene Length | 1329 bp |
|---|
| Protein Length | 442 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 640829706 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001365720 |
|---|
| Protein GI | 153000039 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCACACAC TCAGCAAACT TGCCAGTGTC TTGGCGCTAA GCGGACTGCT CGCAGCCTGC
CAAGATGAAG CCACACCCAT AGATCCAAAA ACCAATGCCA GCCCTATGTA CGCCAAAGGG
TTAACCCTAG CCGCGCCGAG CAATACCGAT CTTGTCGATA GCAATATTGC CAGTCCAACA
CTGGCGCCCA TTAACACAAG TACGGATTAC ATTAGCTTTA TCACCCCTTT GTATGGCGAG
TATCAGGCAA GCGCGCCGCA GCTTGAACAA GCCAGCCAAA GTGACGAGTA TTGGGTCAAT
GTAACCGGCG CGCAGCTTAA TGCGGGCGTG GGCCTCACCA TGAGCCAAGC GTCGAGCCTA
GTGCGCATTG CGCCTCGGGG CGATACCAGT TCTGGCGCCT TAATGCATGC AGAGGCTATT
GCCCCTGAGC GCGTACAAAT TCAGCGCGTT AGCCCTAATC AGTCACCCCA AGGCAAAGCG
GCCAACAGCA GCGGGATAAA CACCAATGAG TCATTGATCA AATCGATGGC CAACGCCGAT
GCCCTTGCTA GCGCAGGATT AACCGATGAT TCCAGCGCAC TGCAAATGTC AGCAAAGGCC
ACACCGGGCC AATATCGCCT GCAGGTCAGT CAGCCGTTAA CGCCAAGCGC CAACTACTTA
GTCAATGTGA AGGAAAAAGG CTCGCCCTAT CAACTGAGTG TCAAAGCCTC CTCCGCTATC
GCGGCTGATG CGCAAACCCT TGGGCTTGAA CTCGCACTCA GCCAAAGTGA TAACACCTTC
GTGCCGCAGG CAACACTCAA GCAAGCTGAT GGCGATATGC AACCACTGAC GATGGTAAAA
CAAGGTGAGA CATGGCAAGC GGTGATCCCC GCGGGCGTGG CACTTTCGAG CACTAATGCG
GGTTTCAGTG AAGTTGAAAT TACAGTGCAA ACCCAAGTCG ATGGCCGCCC AGTACAGCGC
ACGGTCAAAT CTGTCTTTAA GTCCTATGTC AATTCGGCGA GCATCAAGCC CGAAGTGCTC
ACGGTTTGGG ATAAAGGCCT GCCTAACCAA ATCAACTTTG AGTTATCGGT CGCCGAGGCG
GGACGTTTTG GCTTAAGTGG CACGTTAACC GGTACCAATG CCGAAGGTCA AAAGGTGGCG
ATTCTACGTA CCCAAGCGGC TAATTGGCTG ACCCCAGAGT CGCCAAAGTT AAAGCTGATG
TTAGATCCTA AGCTCATCCA AGCCTCGGGT TTACAGCCGC CATTCGAACT CAATGAGTTA
GAACTGCAAG ATCAAGGGCA AATGGCCAGA TTAAGCTATC AAGCCAAAGC ATTGATCTTA
ACCCGCTAA
|
|---|
| Protein sequence | MHTLSKLASV LALSGLLAAC QDEATPIDPK TNASPMYAKG LTLAAPSNTD LVDSNIASPT
LAPINTSTDY ISFITPLYGE YQASAPQLEQ ASQSDEYWVN VTGAQLNAGV GLTMSQASSL
VRIAPRGDTS SGALMHAEAI APERVQIQRV SPNQSPQGKA ANSSGINTNE SLIKSMANAD
ALASAGLTDD SSALQMSAKA TPGQYRLQVS QPLTPSANYL VNVKEKGSPY QLSVKASSAI
AADAQTLGLE LALSQSDNTF VPQATLKQAD GDMQPLTMVK QGETWQAVIP AGVALSSTNA
GFSEVEITVQ TQVDGRPVQR TVKSVFKSYV NSASIKPEVL TVWDKGLPNQ INFELSVAEA
GRFGLSGTLT GTNAEGQKVA ILRTQAANWL TPESPKLKLM LDPKLIQASG LQPPFELNEL
ELQDQGQMAR LSYQAKALIL TR
|
|---|
| |