Gene Shew185_1485 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1485 
Symbol 
ID5371452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand+ 
Start bp1795009 
End bp1795653 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content44% 
IMG OID640829684 
Productouter membrane protein W 
Protein accessionYP_001365698 
Protein GI153000017 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3047] Outer membrane protein W 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0850248 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAACA AAAATACTGT TTCTACACTG ATCGCTGCCA CCCTTTTAGC TGCTGGTTTT 
TCTGCTTCTG TATCGGCTCA CCAAGCAGGT GACATTATCG TTCGTGCGGG TGCCATCGTT 
GTTGCGCCAA ACGAATCAAG CGATGATGTT GCTGGTAAAG GCGAGTTCCA AATCAGTAAC 
GACACTCAAC TGGGTTTGAA CTTTGGTTAT ATGTTGACTG ATAACTTTGG GGTAGAGCTA 
TTAGCAGCAA CGCCTTTTAG CCATGACGTT TCTTTGGGTG GGACTAAAAT TGCTGAAACT 
AAGCAACTGC CGCCAACGCT AGTGGCACAG TACTATTTCG GTAATTCTCA ATCAGTGGTT 
CGCCCTTACA TTGGCGTCGG TGTTAATTAC ACTAACTTTT ATGATAATGA GTTCACCAAT 
GATTTAGGTG GTGCGTTAAC TGACTTAAGC ATGACCACGT CTTGGGGCTT AGCGGCACAA 
GCGGGTATTG ACTATCAGGT TAGCAAAAAC TGGTTAGTGA ACGCATCTGT GTGGTACGCG 
CAAATTAGCA GCGATGTGAA GTTTAAATTA TCGGGTGACA CTGTGGTTAT TGGTACCGAT 
ATTGACCCAT GGGTTTATAT GGTCAGCGTA GGTTACACTT TCTAA
 
Protein sequence
MMNKNTVSTL IAATLLAAGF SASVSAHQAG DIIVRAGAIV VAPNESSDDV AGKGEFQISN 
DTQLGLNFGY MLTDNFGVEL LAATPFSHDV SLGGTKIAET KQLPPTLVAQ YYFGNSQSVV 
RPYIGVGVNY TNFYDNEFTN DLGGALTDLS MTTSWGLAAQ AGIDYQVSKN WLVNASVWYA 
QISSDVKFKL SGDTVVIGTD IDPWVYMVSV GYTF