Gene Shew185_1483 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1483 
Symbol 
ID5371330 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp1792677 
End bp1793327 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content50% 
IMG OID640829682 
Productmaleylacetoacetate isomerase 
Protein accessionYP_001365696 
Protein GI153000015 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID[TIGR01262] maleylacetoacetate isomerase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0333426 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTTT ATGGTTATTG GCGCTCAAGC GCGGCGTACC GTGTTCGCAT CGCCCTCAAT 
CTTAAGGGTA TTTCAGCCGA GCAGTTGTCT GTGCATCTTG TACGTGATGG CGGCGAGCAA
CATAAAGCGG CCTACAGCGC GCTGAATCCT CTGGAGTTAG TGCCAACCTT AACGTTGGAT
GATGAGCTGG ATGCGGATGC TTTGTCGCAA TCCTTAGCCA TTATTGAATA TCTTGATGAG
ATACACCCAC AGTCACCATT ATTACCTGCA TCGGCTCTTG AGCGTGCCCA TGTGCGCGCC
ATGGCACTCA CGGTAGCCTG TGAAATTCAC CCATTAAACA ATTTGCGGGT ATTGCAGTAT
TTAACCCAAA CCTTAGGGGT CGATGAAGCG GCTAAAAATA CTTGGTATCA CCACTGGGTC
GCGAGTGGCT TTGCAGCCTT AGAAACTTTG TTGAAAAGGC ACAGCGGTCG TTACTGCTTT
GGGGATACAG TGACATTAGC CGACTTGTGT TTAGTGCCGC AGGTGTATAA CGCCCAGCGT
TTTAATGTGG ATTTAATGCC TTATCCCAAT GTCATGCGCG TGTGGGCTGA GTGTAATCAG
CTAGAAGCCT TTGCCGATGC GGCCCCGGAG CGCCAAGCGG ATGCTGTGTG A
 
Protein sequence
MKLYGYWRSS AAYRVRIALN LKGISAEQLS VHLVRDGGEQ HKAAYSALNP LELVPTLTLD 
DELDADALSQ SLAIIEYLDE IHPQSPLLPA SALERAHVRA MALTVACEIH PLNNLRVLQY
LTQTLGVDEA AKNTWYHHWV ASGFAALETL LKRHSGRYCF GDTVTLADLC LVPQVYNAQR
FNVDLMPYPN VMRVWAECNQ LEAFADAAPE RQADAV