Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_1477 |
Symbol | |
ID | 5370668 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 1785885 |
End bp | 1786898 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640829676 |
Product | UDP-glucose 4-epimerase |
Protein accession | YP_001365690 |
Protein GI | 153000009 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1087] UDP-glucose 4-epimerase |
TIGRFAM ID | [TIGR01179] UDP-glucose-4-epimerase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00000121809 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACGATTT TAGTGACTGG CGGTGCTGGC TATATTGGCA CTCATACTTT GGTAGAGCTG CTCAATGCAG GCAATGACGT GATTGTGTTA GACAACTTGT CTAATTCGAG CATAGAAGCC TTAAACAGAG TCGAGCGGAT CACTGGTAAA TCGGTCATTT TCTATCAAGG CGATATTCTC AATAAAGCCT TATTACAGAA AGTGTTTAAC GATCATGCTA TCGATTCGGT TATTCACTTT GCGGGATTAA AAGCTGTGGG TGAATCCGTC GCTAAACCCC TTAAGTATTA TGAGAATAAC GTCACAGGAA CCCTGATCCT CTGCCAAGTT ATGGCGGAGT TTAAGGTGAA AAATCTCGTT TTCAGCTCAT CGGCCACTGT ATATGGCGAT CCAGCCAGTT TGCCTATCAC CGAAGACTTT CCCACTGGAG CGACCAATCC CTATGGTCAG TCTAAGTTGA TGGTTGAACA TATACTGGCA GATGTACACA ATGCCGATCC AAGCTGGAAT ATCGCTCGTC TGCGTTATTT TAATCCTGTC GGCGCCCATG CCAGTGGCTT AATCGGCGAA GATCCTAACG ATATCCCTAA CAACTTGATG CCCTTTATTG CGCAGGTTGC CGTGGGTAAA CGTGCCGCCT TAAGCGTGTT TGGTGATGAT TATCCGACTC ATGATGGGAC TGGCGTGCGT GACTATATCC ATGTGGTGGA TTTAGCCAAT GGCCATTTAA AAGCACTGGC CAAATTGGCC ACTAAACCAG GTCTGGTCAC CTATAACTTA GGCACAGGCC AAGGATATAG TGTTTTAGAC ATGGTTCACG CCTTTGAAAA AGCCTGTGGT AACACCATTG CCTACCAAAT TGCGCCACGT CGCCCTGGCG ATATTGCCGC CTGCTACGCC GATCCAACCC ATGCACGGGA AGATCTCGGC TGGCAAGCAA CGCATACGCT AGCAGATATG GCCAACAGTA GCTGGCATTG GCAATCGACC AATCCCAATG GTTATAACGG CTAA
|
Protein sequence | MTILVTGGAG YIGTHTLVEL LNAGNDVIVL DNLSNSSIEA LNRVERITGK SVIFYQGDIL NKALLQKVFN DHAIDSVIHF AGLKAVGESV AKPLKYYENN VTGTLILCQV MAEFKVKNLV FSSSATVYGD PASLPITEDF PTGATNPYGQ SKLMVEHILA DVHNADPSWN IARLRYFNPV GAHASGLIGE DPNDIPNNLM PFIAQVAVGK RAALSVFGDD YPTHDGTGVR DYIHVVDLAN GHLKALAKLA TKPGLVTYNL GTGQGYSVLD MVHAFEKACG NTIAYQIAPR RPGDIAACYA DPTHAREDLG WQATHTLADM ANSSWHWQST NPNGYNG
|
| |