| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1475 |
|---|
| Symbol | |
|---|
| ID | 5370552 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | - |
|---|
| Start bp | 1784746 |
|---|
| End bp | 1785195 |
|---|
| Gene Length | 450 bp |
|---|
| Protein Length | 149 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640829674 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001365688 |
|---|
| Protein GI | 153000007 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1664] Integral membrane protein CcmA involved in cell shape determination |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000000000135685 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGATGT TTGTAAAAAA ACTGTTCTTC CCCCCTAAAA AAAGTCCCTC TTTTAGCTTT
ATTTCTCGAG GCACTAAACT CACGGGGAAC ATCGAATTAA CGGGCGATGT GCTTATTGGC
GGTGATATCC AAGGTCAACT GCTTTCTGAG GCTAATATCA CAATAGAACA AGGCGGTACG
ATTCAAGGCG AAGTAAAGTG CCATGAATTT ATCGTTGACG GACACTTCAA AGGCAGACTC
ATTTGTGAGC GTTTAGTGAT CCAGCGTAAT GGCGTTGTCG ATGGTGAAGT GGCGAGTACT
TCAATGCAAA TTCTTGAGGG CGGCCAGTTT ATCGGCATGC GGATTAAAGA AGATGCGCCA
ACCATTTATT CCCATGCAAT AGGCCACACT CCTGCAACAG ACAATCGTAA CTTATCGCAC
GTACAAAACG ATGTTATAGA ATCTCGCTAA
|
|---|
| Protein sequence | MMMFVKKLFF PPKKSPSFSF ISRGTKLTGN IELTGDVLIG GDIQGQLLSE ANITIEQGGT
IQGEVKCHEF IVDGHFKGRL ICERLVIQRN GVVDGEVAST SMQILEGGQF IGMRIKEDAP
TIYSHAIGHT PATDNRNLSH VQNDVIESR
|
|---|
| |