| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1460 |
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| Symbol | dnaE |
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| ID | 5370191 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 1760235 |
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| End bp | 1763708 |
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| Gene Length | 3474 bp |
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| Protein Length | 1157 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640829659 |
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| Product | DNA polymerase III subunit alpha |
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| Protein accession | YP_001365673 |
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| Protein GI | 152999992 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGATC CTCGTTTTGT GCATCTTCGT GTCCACAGTG ACTTCTCTAT GACCGATGGC
GTGGCCAAGG TTAAGCCGAT TTTGGCGCAG GTGGAAGCGC AGGGAATGGC GGCTGTCGCC
CTGACTGACC AAAACAACTT TTGTGGTTTG GTTAAGTTTT ACAGTGGTTG CCATGGTGCG
GGGATCAAGC CGATTATCGG CGCCGATTTT TGGATGCAAG TGCCTGGATT CGAAGGCGAA
TTATGCGCCT TGACCATAAT TGCGATGAAC AATGTCGGTT ATCAGAATCT GACCCAAATC
ATCAGTCAGG CCTATTTGCG TGGCCAAGTG GCTGGGCGCG TGGTGATCGA CCAAGAGTGG
TTACTCACTT ATAACGAAGG CATTTTGCTG TTATCAGGCG CCAAAGAGGG CGATCTGGGT
AAGGCGCTCC TCAAGGGTAA TAGCACTCAG GTTGAATCTT TATGTGAGTT TTATCAAACT
CATTTCGCCG ATCGTTATTT TCTCGAACTC ATTCGTACCG GCCGCCCCGA CGAAGAGCGC
TATCTGCACA TGGCTGTGAT CTTAGCGCAG GATAAGGGTA TCCCTGTGGT CGCCACTAAT
CAGGTGGTGT TCCTTAAACC TGAGGATTTC GACGCCCATG AAATTCGAGT CGCCATCCAC
GATGGTTTTA CCCTTGCCGA TCCGCGCCGT CCTAAAAAGT ACAGTGAACA GCAGTACTTA
CGTAGCGAAG AGGAAATGTG CGAGCTATTT GCCGACATTC CTGCGGCGCT GGCGAACAGT
GTCGAAATCG CTAAACGTTG TAACGTGACG ATTCGTTTGT ACGAGTATTT CCTGCCCAAC
TTCCCGACGG GCGATATGTC CATCGAAGAC TTTCTGGTCG ATTGCTCGAG GAAGGGCCTT
GAAGAGCGGC TCGGGTTTTT GTTCCCCAAT CCCGAAGTGC GCGCCGAGAA ACGGGGCGAA
TACGATGAGC GGCTCGATAT CGAACTCAAA GTAATCAACC AGATGGGGTT CCCCGGTTAC
TTCTTGATCG TGATGGAGTT CATCCAATGG GGTAAAGATA ACGGTATCCC AGTGGGACCC
GGTCGTGGTT CGGGTGCGGG TTCACTTGTG GCCTATGCGC TCAAAATCAC CGACTTAGAT
CCGCTCGAAT TTGACTTACT GTTCGAACGC TTCTTGAACC CTGAGCGTGT TTCCATGCCC
GACTTTGACG TCGACTTCTG CATGGATAGA CGCGATGAAG TGATCGACCA CGTGGCCGAG
TTGTACGGCC GCGAAGCGGT ATCGCAAATC ATTACCTTCG GTACTATGGC GGCAAAAGCG
GTTATTCGTG ACGTTGGCCG AGTGCTCGGT CATCCCTATG GTTTCGTTGA CCGAATTTCA
AAATTAATTC CACCTGAGCC TGGAATGACA CTGGCGAAAG CCTTTGAAGT CGAGCCAGCG
TTGCAAGAAT CCTATGATGG CGATGAAGAC GTAAAAGATC TGATCGACAT GTGCCGTAAG
CTTGAAGGTG TAACCCGTAA CGCCGGTAAG CACGCCGGTG GTGTAGTGAT TGCACCGACA
AAAATTACCG ATTTTGCGCC GCTCTATTGC GATGCAGAAG GCAAAAACCC AGTAACACAA
TTTGATAAAA ACGACGTTGA AACCGCAGGG CTGGTTAAGT TCGATTTCTT GGGATTAAGA
ACCCTGACGA TTATCGACTG GGCGCTCGAG ATGGTGAACA AGGTCGAAGT GAAAAACGGG
CGCAAACCAA TACGGATTGA GGCGATTTCA CTCACAGATC CCGCCTGTTT CCGTTTGCTG
CAAAAGTATG AAACCACGGC GGTATTCCAG CTCGAATCCC GTGGTATGAA GGATTTGATT
AAGCGTCTGC AGCCCGACTG TTTCGAAGAC ATGATTGCAC TGGTGGCACT ATTCCGTCCG
GGGCCGTTGC AATCGGGCAT GGTAGATAAC TTTATCGAAC GTAAGCATGG GCGCGAGGAA
GTCTCGTACC CAGATTCTCA GTATCAGCAT GAATCGCTTC GAGAACTGTT ATCGCCGACC
TACGGCATTA TTCTGTATCA AGAGCAGGTG ATGCAGATTG CGCAGGTGCT GTCGGGCTAC
ACCCTTGGCG GCGCCGACAT GCTGCGCCGT GCTATGGGTA AGAAAAAGCC CGAAGAGATG
GCTAAGCAGC GCAGTATCTT TAAAGAAGGC GCAATCAATA ACGGCGTCGA TGGCGACTTG
TCGATGAAGA TCTTCGATTT AGTGGAAAAG TTCGCCGGCT ACGGTTTTAA CAAATCCCAC
TCCGCCGCTT ATGCGCTGGT TTCCTATCAG ACCTTATGGC TTAAAACCCA TTTCCCTGCG
CAGTTTATGG CGGCGGTAAT GTCGGCCGAT ATGGATAACA CAGATAAAAT TGTGACCTTG
GTCGATGAAT GTGAACGCAT GGGCTTGCCG CTTATTCCGC CGGATGTGAA CAAAGGTTTG
TTCAAATTTA CCGTCGATGA TGATCTGCGC ATTGTTTATG GCATTGGCGC CATTAAAGGT
GTGGGTGAAG GCCCAGTTGA ATCGATTTTA GAGGCGCGTA AAGACGGCCC CTTTGTCGAT
TTATTCGATT TCTGTGCCCG CATTGATTTG AAAAAACTCA ATAAGCGCGT GATTGAAAAG
CTGATCTGCG CGGGCGCCTT AGACAATCTT GGGCCGCACC GTGCGTCAAT GATGGCCACC
TTGCCCGAAG CCATTCGCGC CGCCGATCAA CATGCTAAAG CCGAAGCGAT TGGCCAACAC
GATATGTTTG GTTTGCTCAA CAGTGAACCC GAAGACAGTA AGCAGCAGTT TGTTGAATGT
ACCCCTTGGC CAGATAAAAT TTGGCTTGAA GGCGAGCGTG AAACCTTAGG CTTGTATTTG
ACCGGTCATC CGATCAATCA GTATTTAAAA GAGCTTAAGC ATTACACGTC CGGGCGTTTG
AAAGATGTGC ATCCTACCGA GCGCGGTAAA ACAGCCAAGG CTGCAGGGTT AGTGGTGGCA
ACACGCGTGA TGTTGACCAA GCGCGGATCG AAAATGGGTC TGTTGACGCT TGATGATAAG
AGCGCGCGGC TTGAGATCAT GTTGTTTACC GAAGCCTTTG AAAAGTTTAA TCATCTGCTG
GAAAAAGATC GTATCCTCAT TTGTGAAGGT GAGGTGAGTT ACGATGATTT CGCCGGCGGC
AACCGCATGA CGGCGCGTAA CATTATCGAC ATCAGTGAGG CGCGAAGTCA CTTTGCTAAG
GCGTTAGAAA TCGATATGGA TGGCAGTGAG TTAACGCCAT CGGCCCTTGA TACCTTCGAG
CAAGCCCTAA GCCCGTGGCG TAACGGCGCC GTGCCTGTGG TGATCAACTA CACTCAAGCC
CTAGCCAAAG GTCAATTTAG ACTCGCCGAT GCTTGGCGAG TGAATCCGAC CGATGACTTG
ATGCTCTCGC TCGAATCGCT ACTCGGGCCA AACAAGGTGA GAATTTTATT CTAA
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| Protein sequence | MSDPRFVHLR VHSDFSMTDG VAKVKPILAQ VEAQGMAAVA LTDQNNFCGL VKFYSGCHGA
GIKPIIGADF WMQVPGFEGE LCALTIIAMN NVGYQNLTQI ISQAYLRGQV AGRVVIDQEW
LLTYNEGILL LSGAKEGDLG KALLKGNSTQ VESLCEFYQT HFADRYFLEL IRTGRPDEER
YLHMAVILAQ DKGIPVVATN QVVFLKPEDF DAHEIRVAIH DGFTLADPRR PKKYSEQQYL
RSEEEMCELF ADIPAALANS VEIAKRCNVT IRLYEYFLPN FPTGDMSIED FLVDCSRKGL
EERLGFLFPN PEVRAEKRGE YDERLDIELK VINQMGFPGY FLIVMEFIQW GKDNGIPVGP
GRGSGAGSLV AYALKITDLD PLEFDLLFER FLNPERVSMP DFDVDFCMDR RDEVIDHVAE
LYGREAVSQI ITFGTMAAKA VIRDVGRVLG HPYGFVDRIS KLIPPEPGMT LAKAFEVEPA
LQESYDGDED VKDLIDMCRK LEGVTRNAGK HAGGVVIAPT KITDFAPLYC DAEGKNPVTQ
FDKNDVETAG LVKFDFLGLR TLTIIDWALE MVNKVEVKNG RKPIRIEAIS LTDPACFRLL
QKYETTAVFQ LESRGMKDLI KRLQPDCFED MIALVALFRP GPLQSGMVDN FIERKHGREE
VSYPDSQYQH ESLRELLSPT YGIILYQEQV MQIAQVLSGY TLGGADMLRR AMGKKKPEEM
AKQRSIFKEG AINNGVDGDL SMKIFDLVEK FAGYGFNKSH SAAYALVSYQ TLWLKTHFPA
QFMAAVMSAD MDNTDKIVTL VDECERMGLP LIPPDVNKGL FKFTVDDDLR IVYGIGAIKG
VGEGPVESIL EARKDGPFVD LFDFCARIDL KKLNKRVIEK LICAGALDNL GPHRASMMAT
LPEAIRAADQ HAKAEAIGQH DMFGLLNSEP EDSKQQFVEC TPWPDKIWLE GERETLGLYL
TGHPINQYLK ELKHYTSGRL KDVHPTERGK TAKAAGLVVA TRVMLTKRGS KMGLLTLDDK
SARLEIMLFT EAFEKFNHLL EKDRILICEG EVSYDDFAGG NRMTARNIID ISEARSHFAK
ALEIDMDGSE LTPSALDTFE QALSPWRNGA VPVVINYTQA LAKGQFRLAD AWRVNPTDDL
MLSLESLLGP NKVRILF
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