Gene Shew185_1459 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1459 
SymbolrnhB 
ID5370190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand+ 
Start bp1759484 
End bp1760116 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content51% 
IMG OID640829658 
Productribonuclease HII 
Protein accessionYP_001365672 
Protein GI152999991 
COG category[L] Replication, recombination and repair 
COG ID[COG0164] Ribonuclease HII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0235521 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCAACTT TTAAAAGTTT ATCCGAAGCC GATTTACTGG CCTTCTCAAC GGGTTTGATT 
GCCGGAGTGG ATGAAGTCGG CCGCGGCCCC TTAGTCGGCG ATGTGGTCAC TGCCGCAGTA 
ATCTTAGATC CGAGCAAGCC CATCAGTGGC CTGAATGATT CTAAAAAACT CAGTGAGAAA 
CGCCGCGAAG CCCTGTTCGA TGAGATTTGT GATAAAGCTT TGTGTTATCA GGTTGGCCGT 
GCCAGTCCTG CTGAAATCGA TGAGCTGAAT ATTTTGCACG CCACTATGTT GGCAATGCAG 
CGCGCGGTTG CTGGGCTTAA TATTGCCCCT GAGCTTGTGC TTGTGGATGG CAATCGTAGC 
CCCATCTTTG TTGCCCATAA TGGCGCAGAG CTTACCAGCC ACAGCATCAT TAAAGGCGAT 
GGTTTGATTG CCAGCATCAG CGCCGCTTCG ATCATCGCGA AAGTGACGCG GGACCGCGAG 
ATGGACGTGC TCGACGCCGC TTATCCGCAA TACGGTTTTG CAAAACATAA GGGCTATCCA 
ACTAAGGCGC ATTTTGAGGC CATAGCCGAA CATGGTGTGT TTGACCAATA TCGTAAAAGT 
TTCAAACCCG TCAAGGCATT ACTGGGACTG TAA
 
Protein sequence
MATFKSLSEA DLLAFSTGLI AGVDEVGRGP LVGDVVTAAV ILDPSKPISG LNDSKKLSEK 
RREALFDEIC DKALCYQVGR ASPAEIDELN ILHATMLAMQ RAVAGLNIAP ELVLVDGNRS 
PIFVAHNGAE LTSHSIIKGD GLIASISAAS IIAKVTRDRE MDVLDAAYPQ YGFAKHKGYP 
TKAHFEAIAE HGVFDQYRKS FKPVKALLGL