| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1451 |
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| Symbol | |
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| ID | 5369339 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 1750128 |
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| End bp | 1751309 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640829650 |
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| Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| Protein accession | YP_001365664 |
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| Protein GI | 152999983 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00179762 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGATTT TGGGTGCTAC CGGCTCTATA GGTGCCAGTA CCTTAAGTGT GATCTCGGCT
AATCCATTCG CTTATAGCGT GTATGGATTA GTGGCCAACG CGAGTGTTGA TAAGATGCTT
GCACTTTGTT TGGCGCATAA ACCGAAAGTG GCGCATATGG TGGATGAAGC GGCAGCAAAA
CAGTTGCGTG CCGTTTTACC TGCGACGCTC AATATCCAAG TCACCACAGG CATGAACGAT
TTACTCGGTT TAGTGACCGC TGCCGAAGTG GATACTGTGA TGGCGGCGAT TGTTGGGGCT
GCTGGGCTAG TACCGACGCT TGAAGCCGTA AAGGCGGGTA AGCGGGTATT ACTGGCCAAC
AAAGAAGCCT TAGTCATGTC AGGTGAGCTG TTTATTGAGG CGACTAAGCG CTCTGGCGCT
GTGCTCTTGC CTGTGGACAG TGAGCATAAT GCCATCTTCC AATGTCTCCC CCAAGAAGTG
CAAGCCAACC TTGGCCGTTG TGACTTAGCG GCATCGGGTA TTTCCCATAT TCTGTTAACC
GGTTCTGGCG GACCTTTCCT GCGGTCGGAT CTTGCGACAC TGGCCGCCAT GACGCCAGCC
CAAGCCTGTA AACATCCTAA TTGGTCCATG GGACCTAAAA TCTCCGTCGA CTCCGCCACT
ATGATGAATA AGGGCTTAGA GTTTATTGAG GCGCGTTGGT TGTTTAACAC TCAGGCTGAG
CAACTTAAGG TTGTTATCCA TCCGCAAAGC GTGATCCACT CTATGGTGCA GTACCGTGAT
GGTTCCGTTA TTGCCCAAAT GGGTAACCCA GATATGCGTA CGCCTATTGC CCATTGCATG
GCTTATCCGC AAAGAATTCA TTCTGGCGTT GAACCTTTAG ATTTTTTCAA AGTCGGACAG
TTAAGCTTTT ATGAACCTGA TTTTGAACGT TTCCCCTGTT TAGCTCTGGC AATGGACGCG
TGTGCCCAAG GACAAGAGGC GACAACTGTG TTAAATGCTG CCAATGAGAT TGCCGTTGAA
GCGTTTTTAC AGGGACAAAT TGGCTTTACT CAAATTGCAA AAGTGAACGA AGCTTGTTTA
GTGACAGTGC CTAAGCGTCC TATGGGCAGC ATAGAAGATA TTTTAGCCTT AGATGCGCAA
ACCCGCGTCT ATGCGCGTGA GACCTTAGCA AGCATCGCTT AG
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| Protein sequence | MVILGATGSI GASTLSVISA NPFAYSVYGL VANASVDKML ALCLAHKPKV AHMVDEAAAK
QLRAVLPATL NIQVTTGMND LLGLVTAAEV DTVMAAIVGA AGLVPTLEAV KAGKRVLLAN
KEALVMSGEL FIEATKRSGA VLLPVDSEHN AIFQCLPQEV QANLGRCDLA ASGISHILLT
GSGGPFLRSD LATLAAMTPA QACKHPNWSM GPKISVDSAT MMNKGLEFIE ARWLFNTQAE
QLKVVIHPQS VIHSMVQYRD GSVIAQMGNP DMRTPIAHCM AYPQRIHSGV EPLDFFKVGQ
LSFYEPDFER FPCLALAMDA CAQGQEATTV LNAANEIAVE AFLQGQIGFT QIAKVNEACL
VTVPKRPMGS IEDILALDAQ TRVYARETLA SIA
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